Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 RNU7-99P-201ENST00000516271 62 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 RNA5SP54-201ENST00000516951 92 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 RNU6-430P-201ENST00000517078 107 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AC011604.1-201ENST00000545978 196 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AL121579.1-201ENST00000555129 305 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.54□□□□□ -2.32
UPK3BQ9BT76 AL357078.3-201ENST00000607528 618 ntBASIC0.54□□□□□ -2.32
UPK3BQ9BT76 RNU6-199P-201ENST00000362954 107 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 RNU6-82P-201ENST00000363970 107 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 Y_RNA.355-201ENST00000365462 98 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 MIR521-1-201ENST00000384902 87 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AL049545.1-201ENST00000401856 572 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.53□□□□□ -2.32
UPK3BQ9BT76 MTCO3P38-201ENST00000468910 766 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.53□□□□□ -2.32
UPK3BQ9BT76 RNU6-322P-201ENST00000516010 103 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 RNU6-197P-201ENST00000516680 100 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 MTCO2P4-201ENST00000517968 247 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AP001372.4-201ENST00000524889 472 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AL590705.4-201ENST00000532209 134 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AC007834.2-201ENST00000536310 343 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AL157687.1-201ENST00000554853 619 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 MIR4778-201ENST00000577635 80 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 MIR4424-201ENST00000585257 86 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AC040904.1-201ENST00000590850 223 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 Z94722.1-201ENST00000604328 474 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AC093424.1-201ENST00000604999 338 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 SNORA28-201ENST00000606769 126 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 SNORD11B-201ENST00000607707 90 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 MIR8076-201ENST00000611401 83 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 RMST_2.1-201ENST00000617263 136 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AC103705.1-201ENST00000619013 241 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 U6.73-201ENST00000619194 103 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 AL603755.1-201ENST00000619504 163 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 MIR6866-201ENST00000638146 69 ntBASIC0.53□□□□□ -2.32
UPK3BQ9BT76 RNU6-1266P-201ENST00000362794 105 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 RNU6-245P-201ENST00000384020 107 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 RNU6-784P-201ENST00000384330 106 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 RNU6-933P-201ENST00000384424 107 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 MIR653-201ENST00000385279 96 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 MIR942-201ENST00000401111 86 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 AL451046.2-201ENST00000403074 277 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.52□□□□□ -2.33
UPK3BQ9BT76 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.52□□□□□ -2.33
UPK3BQ9BT76 RPL39P39-201ENST00000455840 151 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 RPL23AP75-201ENST00000491601 451 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 RN7SKP287-201ENST00000516546 266 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 AC090049.2-201ENST00000550377 109 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 MIR3908-201ENST00000579798 126 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 AC022432.1-201ENST00000595739 310 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 AL357312.1-201ENST00000603879 298 ntBASIC0.52□□□□□ -2.33
UPK3BQ9BT76 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AP000568.1-201ENST00000282964 442 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 RNU6-214P-201ENST00000384130 107 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 RNY3P9-201ENST00000384727 106 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 SNORD37.1-201ENST00000390968 65 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AF228730.1-201ENST00000397972 663 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AL355796.1-201ENST00000406706 323 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 MIR1185-2-201ENST00000408687 86 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 RNU6-325P-201ENST00000411132 105 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 RPS3AP1-201ENST00000413190 320 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AL359672.1-201ENST00000442302 409 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 RNU6-1198P-201ENST00000516904 67 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 RNA5SP454-201ENST00000517231 127 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 MTND1P5-201ENST00000517906 940 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AC016957.1-201ENST00000534895 309 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 MIR5000-201ENST00000577717 103 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AC092747.3-201ENST00000603769 301 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 AC022709.1-201ENST00000615967 87 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 MIR6734-201ENST00000621166 68 ntBASIC0.51□□□□□ -2.33
UPK3BQ9BT76 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.51□□□□□ -2.33
UPK3BQ9BT76 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
UPK3BQ9BT76 Y_RNA.169-201ENST00000363745 96 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 Y_RNA.354-201ENST00000365448 111 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 Y_RNA.363-201ENST00000365529 113 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 MIR487A-201ENST00000385009 80 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
UPK3BQ9BT76 RNU6-1158P-201ENST00000391167 107 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.5□□□□□ -2.33
UPK3BQ9BT76 AC073464.1-201ENST00000429823 534 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 MRPS10P2-201ENST00000431226 381 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 MTND5P15-201ENST00000434246 349 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.5□□□□□ -2.33
UPK3BQ9BT76 NDUFB4P10-201ENST00000452541 359 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms