Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AC093303.1-201ENST00000514549 295 ntBASIC1.94□□□□□ -2.1
SDF4Q9BRK5 Y_RNA.706-201ENST00000516933 99 ntBASIC1.94□□□□□ -2.1
SDF4Q9BRK5 Y_RNA.708-201ENST00000516950 96 ntBASIC1.94□□□□□ -2.1
SDF4Q9BRK5 AP003033.1-201ENST00000527244 415 ntBASIC1.94□□□□□ -2.1
SDF4Q9BRK5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.94□□□□□ -2.1
SDF4Q9BRK5 AC084364.2-201ENST00000546924 395 ntBASIC1.94□□□□□ -2.1
SDF4Q9BRK5 AL121579.1-201ENST00000555129 305 ntBASIC1.94□□□□□ -2.1
SDF4Q9BRK5 AL355802.3-201ENST00000607571 545 ntBASIC1.94□□□□□ -2.1
SDF4Q9BRK5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.94□□□□□ -2.1
SDF4Q9BRK5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SDF4Q9BRK5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SDF4Q9BRK5 Y_RNA.48-201ENST00000362710 103 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 RNU6-601P-201ENST00000384540 107 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 MIR515-2-201ENST00000384883 83 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 MIR515-1-201ENST00000384884 83 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 MIR548B-201ENST00000385247 97 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 AC008134.1-201ENST00000420943 193 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 MTND3P23-201ENST00000431980 347 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.93□□□□□ -2.1
SDF4Q9BRK5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.93□□□□□ -2.1
SDF4Q9BRK5 SNORD13-201ENST00000459299 104 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 AC091179.3-201ENST00000474761 144 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 AC116353.2-201ENST00000505332 712 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 RNU6-1114P-201ENST00000516022 107 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 Y_RNA.670-201ENST00000516255 105 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 AC025647.1-201ENST00000517879 253 ntBASIC1.93□□□□□ -2.1
SDF4Q9BRK5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.93□□□□□ -2.1
SDF4Q9BRK5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.93□□□□□ -2.1
SDF4Q9BRK5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SDF4Q9BRK5 Y_RNA.160-201ENST00000363677 92 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 Y_RNA.179-201ENST00000363844 90 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 SNORA72.2-201ENST00000365028 127 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 MT-TL1-201ENST00000386347 75 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 RNU6-360P-201ENST00000390944 104 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.92□□□□□ -2.1
SDF4Q9BRK5 HMGN2P34-201ENST00000437647 269 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 HSPE1P21-201ENST00000438283 308 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 AC025465.3-201ENST00000510570 311 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
SDF4Q9BRK5 AK6P2-201ENST00000549020 471 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 AC005668.1-201ENST00000571142 476 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 MIR4255-201ENST00000579351 72 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 AC005014.2-201ENST00000607795 599 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 MIR8074-201ENST00000615081 81 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 AC006001.4-201ENST00000622243 395 ntBASIC1.92□□□□□ -2.1
SDF4Q9BRK5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SDF4Q9BRK5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SDF4Q9BRK5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SDF4Q9BRK5 Y_RNA.2-201ENST00000362330 96 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 Y_RNA.88-201ENST00000363029 99 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 RNA5SP363-201ENST00000365072 115 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 RNU6-281P-201ENST00000384212 103 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SDF4Q9BRK5 MIR934-201ENST00000401241 83 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 MIR1185-2-201ENST00000408687 86 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 AC016909.1-201ENST00000415916 166 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 AL445305.1-201ENST00000432577 575 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 Y_RNA.691-201ENST00000516611 103 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 RNA5SP481-201ENST00000516814 122 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 AC105029.1-201ENST00000520250 669 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.91□□□□□ -2.1
SDF4Q9BRK5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.91□□□□□ -2.1
SDF4Q9BRK5 AC010999.1-201ENST00000611856 324 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.91□□□□□ -2.1
SDF4Q9BRK5 SNORD87-201ENST00000364849 89 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 RNU6-1240P-201ENST00000365155 104 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 RNU6-439P-201ENST00000384188 106 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.473-201ENST00000384333 102 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.9□□□□□ -2.11
SDF4Q9BRK5 USP9YP16-201ENST00000430287 407 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 HSPE1P9-201ENST00000440046 311 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 USP9YP23-201ENST00000455085 407 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 RPL31P58-201ENST00000469001 379 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 HMGN1P13-201ENST00000505795 138 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 AC005899.2-201ENST00000584353 90 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 AC009229.3-201ENST00000608056 282 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 uc_338.5-201ENST00000611839 155 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.9□□□□□ -2.11
SDF4Q9BRK5 AC099654.5-201ENST00000636479 350 ntBASIC1.9□□□□□ -2.11
SDF4Q9BRK5 RNY1P16-201ENST00000363063 111 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.106-201ENST00000363189 100 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.184-201ENST00000363884 108 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.415-201ENST00000384012 112 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 RNU6-700P-201ENST00000391043 107 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 RNU6-876P-201ENST00000391295 104 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 MIR190B-201ENST00000401119 79 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 MIR1253-201ENST00000408273 105 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 RPL31P63-201ENST00000422565 375 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 FTH1P12-201ENST00000432137 551 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 AC027575.1-201ENST00000481064 460 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 RNA5SP458-201ENST00000516188 119 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 AC024995.1-201ENST00000523014 93 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 CBX3P4-201ENST00000538909 354 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.89□□□□□ -2.11
SDF4Q9BRK5 MIR5695-201ENST00000579717 85 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 AC022306.2-201ENST00000617563 647 ntBASIC1.89□□□□□ -2.11
SDF4Q9BRK5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms