Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 SNORD115-7-201ENST00000365306 82 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 MIR516B2-201ENST00000385190 85 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC098592.1-201ENST00000419352 333 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 ZNF885P-201ENST00000420174 1098 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 PIGPP3-201ENST00000425307 415 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AL392103.1-201ENST00000447000 198 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC091021.1-201ENST00000468051 388 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 RNA5SP436-201ENST00000516020 115 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 SNORA19.3-201ENST00000516165 130 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC093027.1-201ENST00000546698 429 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 MIR4438-201ENST00000585271 93 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC002044.1-201ENST00000606707 158 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC022709.1-201ENST00000615967 87 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 MIR8070-201ENST00000616510 88 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC104260.1-201ENST00000616660 539 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 AC126544.2-201ENST00000625174 749 ntBASIC-0.36□□□□□ -2.47
VPS25Q9BRG1 RNU6-179P-201ENST00000363350 107 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 RNU6-756P-201ENST00000383997 107 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 RNU6-127P-201ENST00000390897 107 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 RNU6-550P-201ENST00000391057 101 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 AL590632.1-201ENST00000424289 371 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 AC119618.1-201ENST00000434191 222 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 RNA5SP220-201ENST00000516298 104 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 RNU6-977P-201ENST00000516411 103 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 AC112191.3-201ENST00000604371 277 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 AC080013.3-201ENST00000606839 578 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 MIR8076-201ENST00000611401 83 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 AC010999.1-201ENST00000611856 324 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 MIR6755-201ENST00000619993 66 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 AC139792.3-201ENST00000623525 224 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.37□□□□□ -2.47
VPS25Q9BRG1 AL589826.1-201ENST00000340697 249 ntBASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 SNORD87-201ENST00000364849 89 ntBASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 MIR891A-201ENST00000401237 79 ntBASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 Z98949.2-201ENST00000440996 144 ntBASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 RPS3AP17-201ENST00000472594 777 ntBASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 RPL23AP54-201ENST00000495129 419 ntBASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 AC107401.1-201ENST00000503426 685 ntBASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 MIR4764-201ENST00000580680 88 ntBASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 AC010487.4-201ENST00000637027 61 ntBASIC-0.38□□□□□ -2.47
VPS25Q9BRG1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 SNORA9.1-201ENST00000362412 131 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 U8.7-201ENST00000364940 136 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 ELOCP4-201ENST00000420090 333 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 MTCO2P23-201ENST00000425216 680 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 AC005534.2-201ENST00000431047 433 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 AK6P2-201ENST00000549020 471 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 AP001542.1-201ENST00000591314 200 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 AC112187.2-201ENST00000604345 283 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 RMST_3.1-201ENST00000611651 109 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 AP000943.4-201ENST00000622912 357 ntBASIC-0.39□□□□□ -2.47
VPS25Q9BRG1 RNU6-222P-201ENST00000362438 107 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 SNORD114-26-201ENST00000363543 72 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 RNA5SP128-201ENST00000365305 116 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 MIR610-201ENST00000385139 96 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 MIR644A-201ENST00000385262 94 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 RNA5SP63-201ENST00000391225 112 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 MIR548H2-201ENST00000408874 88 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 RNA5SP494-201ENST00000410653 129 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 MRPS10P1-201ENST00000448483 130 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 AC010493.1-201ENST00000513479 292 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 RNU7-129P-201ENST00000516128 62 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 SNORA74.3-201ENST00000517108 154 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 SNORA25.17-201ENST00000517184 124 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 AP003049.1-201ENST00000529418 457 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 MIR4305-201ENST00000583252 102 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 BNIP3P40-201ENST00000596017 556 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 AC010620.1-201ENST00000601088 1102 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 SCARNA4-201ENST00000629045 128 ntBASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.4□□□□□ -2.47
VPS25Q9BRG1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.47
VPS25Q9BRG1 RNU6-833P-201ENST00000363486 107 ntBASIC-0.41□□□□□ -2.48
VPS25Q9BRG1 RNA5SP48-201ENST00000363969 126 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms