Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MZT1P2-201ENST00000604387 248 ntBASIC1.78□□□□□ -2.12
CPNE1Q99829 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
CPNE1Q99829 AC069114.2-201ENST00000604699 304 ntBASIC1.78□□□□□ -2.12
CPNE1Q99829 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.78□□□□□ -2.12
CPNE1Q99829 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.78□□□□□ -2.12
CPNE1Q99829 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.78□□□□□ -2.12
CPNE1Q99829 MIR1302-1-201ENST00000637932 143 ntBASIC1.78□□□□□ -2.12
CPNE1Q99829 RNU1-96P-201ENST00000364163 162 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 Y_RNA.500-201ENST00000384466 111 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 Y_RNA.577-201ENST00000384794 101 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 MIR548B-201ENST00000385247 97 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CPNE1Q99829 AC099677.2-201ENST00000436385 175 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 FGF7P4-201ENST00000509595 295 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 CYCSP23-201ENST00000519781 313 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 SUB1P3-201ENST00000564581 315 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 AC010900.2-201ENST00000604508 210 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 AC006001.4-201ENST00000622243 395 ntBASIC1.77□□□□□ -2.13
CPNE1Q99829 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CPNE1Q99829 snoU2-30.2-201ENST00000362805 70 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 Y_RNA.259-201ENST00000364619 101 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 RNU6-99P-201ENST00000364721 107 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 RNU6-890P-201ENST00000384121 107 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 RNY3P14-201ENST00000384309 102 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 Y_RNA.557-201ENST00000384680 107 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 AL117342.1-201ENST00000404861 406 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 MIR1185-2-201ENST00000408687 86 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 RNU6-1304P-201ENST00000411374 106 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 CST2P1-201ENST00000425770 87 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.76□□□□□ -2.13
CPNE1Q99829 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.76□□□□□ -2.13
CPNE1Q99829 AC010095.1-201ENST00000443543 144 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.76□□□□□ -2.13
CPNE1Q99829 RPL30P15-201ENST00000457129 321 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 RPL23AP42-201ENST00000471152 471 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 RPS29P11-201ENST00000496507 171 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.76□□□□□ -2.13
CPNE1Q99829 AC022493.2-201ENST00000506122 481 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 RNA5SP182-201ENST00000516064 82 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.76□□□□□ -2.13
CPNE1Q99829 MIR4648-201ENST00000580107 72 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 AC125232.2-201ENST00000592457 143 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 AC104260.1-201ENST00000616660 539 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 MIR338-201ENST00000636369 67 ntBASIC1.76□□□□□ -2.13
CPNE1Q99829 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.76□□□□□ -2.13
CPNE1Q99829 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
CPNE1Q99829 Y_RNA.70-201ENST00000362886 110 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 Y_RNA.263-201ENST00000364659 114 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 Y_RNA.358-201ENST00000365491 99 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 MIR625-201ENST00000385047 85 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 MIR1253-201ENST00000408273 105 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 Y_RNA.595-201ENST00000410403 105 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 RNU6-1001P-201ENST00000411265 100 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.75□□□□□ -2.13
CPNE1Q99829 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 MIR2053-201ENST00000459295 91 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 UBE2DNL-203ENST00000474922 222 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 AC025647.1-201ENST00000517879 253 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 AK6P2-201ENST00000549020 471 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.75□□□□□ -2.13
CPNE1Q99829 AC110588.1-201ENST00000559699 137 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 MIR1244-1-201ENST00000612829 85 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 AC126177.8-201ENST00000618339 1015 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 MIR1244-3-201ENST00000635744 85 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 MIR1244-2-201ENST00000636449 85 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 MIR1244-4-202ENST00000636813 85 ntBASIC1.75□□□□□ -2.13
CPNE1Q99829 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CPNE1Q99829 RNU6-112P-201ENST00000363599 104 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 RNU6-879P-201ENST00000364328 108 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 RNU6-1019P-201ENST00000364424 107 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 RNU6-1240P-201ENST00000365155 104 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 MIR329-1-201ENST00000385028 80 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 MIR9-3-201ENST00000385084 90 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 RNY4P36-201ENST00000391116 96 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 AL079342.1-201ENST00000401460 267 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.74□□□□□ -2.13
CPNE1Q99829 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.74□□□□□ -2.13
CPNE1Q99829 MTCO3P10-201ENST00000455912 772 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 ELOCP24-201ENST00000456370 334 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 AC010409.1-201ENST00000487382 476 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 RNU6-470P-201ENST00000515954 104 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 MIR2355-201ENST00000517199 87 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 AC022868.1-201ENST00000517767 391 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.74□□□□□ -2.13
CPNE1Q99829 AC080078.3-201ENST00000605407 463 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 AC116312.1-201ENST00000606841 314 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.74□□□□□ -2.13
CPNE1Q99829 MTND4LP32-201ENST00000636111 270 ntBASIC1.74□□□□□ -2.13
CPNE1Q99829 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CPNE1Q99829 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CPNE1Q99829 SNORA72.2-201ENST00000365028 127 ntBASIC1.73□□□□□ -2.13
CPNE1Q99829 RNU6-1145P-201ENST00000384246 107 ntBASIC1.73□□□□□ -2.13
CPNE1Q99829 MIR515-2-201ENST00000384883 83 ntBASIC1.73□□□□□ -2.13
CPNE1Q99829 MIR515-1-201ENST00000384884 83 ntBASIC1.73□□□□□ -2.13
CPNE1Q99829 RNU6-1156P-201ENST00000410365 100 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms