Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.63□□□□□ -1.99
TIMP4Q99727 AL135938.1-201ENST00000443141 297 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 RPS3P1-201ENST00000456781 192 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 SNORA59A-201ENST00000459326 152 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.63□□□□□ -1.99
TIMP4Q99727 HMGB3P3-201ENST00000510526 400 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.63□□□□□ -1.99
TIMP4Q99727 MIR4308-201ENST00000580634 81 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 AC069528.2-201ENST00000624849 1991 ntBASIC2.63□□□□□ -1.99
TIMP4Q99727 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
TIMP4Q99727 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
TIMP4Q99727 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
TIMP4Q99727 Y_RNA.262-201ENST00000364641 102 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 SNORA9.2-201ENST00000365361 133 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 RNU6-1264P-201ENST00000383891 107 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 MIR181A2-201ENST00000384863 110 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 OOSP1P1-201ENST00000423265 274 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 AC104332.2-201ENST00000429959 156 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.62□□□□□ -1.99
TIMP4Q99727 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.62□□□□□ -1.99
TIMP4Q99727 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 RNU6-436P-201ENST00000516171 114 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 Y_RNA.703-201ENST00000516846 111 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 RNU6-1212P-201ENST00000517023 104 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TIMP4Q99727 ELOCP29-201ENST00000588193 334 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 AC090115.4-201ENST00000609970 188 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 AC096644.4-201ENST00000563417 2912 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 AC009487.2-201ENST00000420969 6821 ntBASIC2.62□□□□□ -1.99
TIMP4Q99727 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.62□□□□□ -1.99
TIMP4Q99727 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.62□□□□□ -1.99
TIMP4Q99727 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.61□□□□□ -1.99
TIMP4Q99727 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TIMP4Q99727 RNU6-804P-201ENST00000384286 107 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 RNA5SP354-201ENST00000391247 136 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 AL031121.1-201ENST00000406553 254 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 AL365496.1-201ENST00000426885 215 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 AC091021.1-201ENST00000468051 388 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.61□□□□□ -1.99
TIMP4Q99727 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TIMP4Q99727 RNU6-1219P-201ENST00000516143 112 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 RNU6-346P-201ENST00000516288 111 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 RNU6-344P-201ENST00000516635 111 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 RNU2-12P-201ENST00000517216 168 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 AP005660.1-201ENST00000522972 293 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.61□□□□□ -1.99
TIMP4Q99727 MRPS18CP4-201ENST00000535821 231 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 GTF3AP2-201ENST00000557014 266 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 MIR3910-1-201ENST00000580936 111 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 AL008718.3-201ENST00000610217 321 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 MIR6852-201ENST00000621699 66 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 U6.106-201ENST00000636360 105 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 AC068205.3-201ENST00000636385 468 ntBASIC2.61□□□□□ -1.99
TIMP4Q99727 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TIMP4Q99727 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.61□□□□□ -1.99
TIMP4Q99727 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.61□□□□□ -1.99
TIMP4Q99727 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
TIMP4Q99727 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.6□□□□□ -1.99
TIMP4Q99727 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.6□□□□□ -1.99
TIMP4Q99727 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TIMP4Q99727 RNU6-1272P-201ENST00000362776 107 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 Y_RNA.170-201ENST00000363746 110 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 Y_RNA.304-201ENST00000365011 112 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 RNU6-1248P-201ENST00000391096 64 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 RNA5SP504-201ENST00000410676 117 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 AC097463.2-201ENST00000421074 142 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.6□□□□□ -1.99
TIMP4Q99727 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.6□□□□□ -1.99
TIMP4Q99727 AC091826.1-201ENST00000514065 313 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 AC079598.5-201ENST00000547460 117 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.6□□□□□ -1.99
TIMP4Q99727 AL670379.2-201ENST00000604983 252 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 uc_338.14-201ENST00000613162 166 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 AC090517.3-201ENST00000625170 141 ntBASIC2.6□□□□□ -1.99
TIMP4Q99727 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TIMP4Q99727 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.59□□□□□ -1.99
TIMP4Q99727 AC026241.1-201ENST00000517873 2142 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TIMP4Q99727 RNU1-105P-201ENST00000363470 161 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 Y_RNA.240-201ENST00000364469 95 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 AL357139.1-201ENST00000407792 426 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 SNORD88.1-201ENST00000408684 91 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 AC009414.1-201ENST00000427200 443 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
TIMP4Q99727 U8.19-201ENST00000459095 133 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 Y_RNA.637-201ENST00000459424 114 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.59□□□□□ -1.99
TIMP4Q99727 RPS27P26-201ENST00000494583 239 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.59□□□□□ -1.99
TIMP4Q99727 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.59□□□□□ -1.99
TIMP4Q99727 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.59□□□□□ -1.99
TIMP4Q99727 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TIMP4Q99727 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.59□□□□□ -2
TIMP4Q99727 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.58□□□□□ -2
TIMP4Q99727 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.58□□□□□ -2
TIMP4Q99727 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TIMP4Q99727 AC108206.1-201ENST00000570186 4159 ntBASIC2.58□□□□□ -2
TIMP4Q99727 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms