Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.42□□□□□ -2.02
MEIS3Q99687 Y_RNA.40-201ENST00000362645 93 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU6-529P-201ENST00000363383 104 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU6-1285P-201ENST00000363480 105 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU6-727P-201ENST00000363592 107 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNA5SP139-201ENST00000364340 117 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU6-740P-201ENST00000364734 105 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNA5SP138-201ENST00000365098 114 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU6-290P-201ENST00000365212 101 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU6-142P-201ENST00000384019 107 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 Y_RNA.418-201ENST00000384029 102 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 Y_RNA.446-201ENST00000384178 104 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU6-622P-201ENST00000384272 103 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.42□□□□□ -2.02
MEIS3Q99687 AC244670.1-201ENST00000436879 112 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 MRPS10P1-201ENST00000448483 130 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.42□□□□□ -2.02
MEIS3Q99687 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.42□□□□□ -2.02
MEIS3Q99687 SNORA40.9-201ENST00000515895 93 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 SNORD116-28-201ENST00000516123 91 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU5B-3P-201ENST00000516601 115 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU1-40P-201ENST00000516816 164 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 RNU1-97P-201ENST00000516872 164 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 MZT1P2-201ENST00000604387 248 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 AC004792.1-201ENST00000614523 137 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 U2.14-201ENST00000615943 113 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.42□□□□□ -2.02
MEIS3Q99687 MIR3199-2-201ENST00000636243 86 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 ZNF204P-201ENST00000416749 2397 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 ZNF355P-201ENST00000427301 3216 ntBASIC2.42□□□□□ -2.02
MEIS3Q99687 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
MEIS3Q99687 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
MEIS3Q99687 RNU6-1141P-201ENST00000364520 107 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 RNA5SP37-201ENST00000365420 130 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 RNU6-1062P-201ENST00000383908 107 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 MIR1298-201ENST00000408783 112 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 RNU4-61P-201ENST00000411243 107 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.41□□□□□ -2.02
MEIS3Q99687 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.41□□□□□ -2.02
MEIS3Q99687 AC012308.1-201ENST00000451232 178 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 snoU13.15-201ENST00000459407 104 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 AC073901.1-201ENST00000462471 408 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 AC016632.1-201ENST00000503994 196 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 AC107393.1-201ENST00000512403 346 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 RNU5F-8P-201ENST00000515941 111 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 RN7SKP49-201ENST00000516675 260 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 AC022559.1-201ENST00000520905 205 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.41□□□□□ -2.02
MEIS3Q99687 MIR4298-201ENST00000584380 73 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.41□□□□□ -2.02
MEIS3Q99687 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
MEIS3Q99687 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MEIS3Q99687 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
MEIS3Q99687 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
MEIS3Q99687 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
MEIS3Q99687 AC010680.1-201ENST00000590024 3590 ntBASIC2.4□□□□□ -2.02
MEIS3Q99687 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.4□□□□□ -2.02
MEIS3Q99687 AC022336.2-201ENST00000568966 2538 ntBASIC2.4□□□□□ -2.02
MEIS3Q99687 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.4□□□□□ -2.02
MEIS3Q99687 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
MEIS3Q99687 RNU4-90P-201ENST00000362773 141 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 Y_RNA.200-201ENST00000364018 102 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 RNU6-1145P-201ENST00000384246 107 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 SNORD63-201ENST00000384262 68 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 SNORD58.1-201ENST00000391313 66 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 RN7SKP61-201ENST00000410642 295 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.4□□□□□ -2.03
MEIS3Q99687 RPS15AP5-201ENST00000436276 388 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 AL714022.1-201ENST00000439897 151 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 SNORA31.6-201ENST00000516241 130 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 RNU6-182P-201ENST00000516970 105 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.4□□□□□ -2.03
MEIS3Q99687 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.4□□□□□ -2.03
MEIS3Q99687 AC024405.2-202ENST00000532731 184 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.4□□□□□ -2.03
MEIS3Q99687 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.4□□□□□ -2.03
MEIS3Q99687 MIR3145-201ENST00000580727 82 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 AC091152.3-201ENST00000604227 325 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 BX284668.6-201ENST00000606899 438 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 AC098479.1-201ENST00000609225 154 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 FTX_2.1-201ENST00000618816 94 ntBASIC2.4□□□□□ -2.03
MEIS3Q99687 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.4□□□□□ -2.03
MEIS3Q99687 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.4□□□□□ -2.03
MEIS3Q99687 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MEIS3Q99687 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.39□□□□□ -2.03
MEIS3Q99687 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MEIS3Q99687 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
MEIS3Q99687 Y_RNA.29-201ENST00000362570 113 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 RNY1-201ENST00000364228 113 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 RNU6-1175P-201ENST00000365200 107 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 RNU6-47P-201ENST00000383866 107 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 Y_RNA.569-201ENST00000384749 103 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 RPL19P1-201ENST00000411635 428 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 AC012306.1-201ENST00000423267 114 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.39□□□□□ -2.03
MEIS3Q99687 HMGN2P3-201ENST00000433603 273 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 HMGN2P5-201ENST00000436882 273 ntBASIC2.39□□□□□ -2.03
MEIS3Q99687 AC074198.2-201ENST00000508153 258 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms