Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 U2.15-201ENST00000611544 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.16-201ENST00000613119 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.12-201ENST00000613778 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.20-201ENST00000613956 192 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.9-201ENST00000615427 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.11-201ENST00000616345 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.2-201ENST00000616535 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.3-201ENST00000617785 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.19-201ENST00000618602 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 RNU2-1-201ENST00000618664 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.6-201ENST00000619225 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.5-201ENST00000619465 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U2.10-201ENST00000620268 191 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.55□□□□□ -2.16
RAB40CQ96S21 MIR219B-201ENST00000637023 88 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RAB40CQ96S21 MTND5P35-201ENST00000557537 1720 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 MIR424-201ENST00000362227 98 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 SNORA72.1-201ENST00000363485 129 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 RNU6-1188P-201ENST00000363795 107 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 RNU6-1019P-201ENST00000364424 107 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.54□□□□□ -2.16
RAB40CQ96S21 Y_RNA.474-201ENST00000384341 102 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 RNU6-296P-201ENST00000384608 107 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 SNORA64-201ENST00000384674 134 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 RN7SKP223-201ENST00000410582 62 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 RNU6-1001P-201ENST00000411265 100 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.54□□□□□ -2.16
RAB40CQ96S21 OOSP1P1-201ENST00000423265 274 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 AC245047.4-201ENST00000433189 144 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 AC010095.1-201ENST00000443543 144 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 AC025647.1-201ENST00000517879 253 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 AK6P2-201ENST00000549020 471 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 MIR4801-201ENST00000582704 82 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 MIR5690-201ENST00000583739 73 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 UBE2V2P2-201ENST00000587677 504 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 AC113139.1-201ENST00000605049 239 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 Y_RNA.783-201ENST00000613546 102 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.54□□□□□ -2.16
RAB40CQ96S21 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.54□□□□□ -2.16
RAB40CQ96S21 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.54□□□□□ -2.16
RAB40CQ96S21 AC010615.1-201ENST00000594254 1764 ntBASIC1.54□□□□□ -2.16
RAB40CQ96S21 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
RAB40CQ96S21 Y_RNA.142-201ENST00000363491 102 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 SNORA16.1-201ENST00000364597 132 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 RNU6-338P-201ENST00000383888 105 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 RNU6-417P-201ENST00000384712 107 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 MIR520A-201ENST00000384862 85 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RAB40CQ96S21 RNA5SP213-201ENST00000391031 106 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 AL023284.1-201ENST00000403956 276 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 RNU2-7P-201ENST00000410794 178 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 Y_RNA.646-201ENST00000410980 101 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 RNU6-1304P-201ENST00000411374 106 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 AC016909.1-201ENST00000415916 166 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 EBAG9P1-201ENST00000418955 543 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 AL445685.2-201ENST00000422551 342 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 EIF1P2-201ENST00000428233 350 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 MTND4P18-201ENST00000447010 465 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 RNU6-559P-201ENST00000516151 98 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 APOOP3-201ENST00000536787 586 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 AC084364.2-201ENST00000546924 395 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 AC125232.2-201ENST00000592457 143 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 AC016925.2-201ENST00000605108 242 ntBASIC1.53□□□□□ -2.16
RAB40CQ96S21 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.53□□□□□ -2.16
RAB40CQ96S21 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.53□□□□□ -2.16
RAB40CQ96S21 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
RAB40CQ96S21 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RAB40CQ96S21 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.52□□□□□ -2.17
RAB40CQ96S21 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RAB40CQ96S21 RNU4-42P-201ENST00000364738 142 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 RNU6-1240P-201ENST00000365155 104 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 RNU6-439P-201ENST00000384188 106 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 RNU6-310P-201ENST00000384655 107 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 Y_RNA.557-201ENST00000384680 107 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 MIR1185-2-201ENST00000408687 86 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 UBE2V1P7-201ENST00000446395 340 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 RPL23AP63-201ENST00000498752 471 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 HMGN1P13-201ENST00000505795 138 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 RNU6-107P-201ENST00000516643 102 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 MIR3618-201ENST00000580330 88 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.52□□□□□ -2.17
RAB40CQ96S21 MIR1244-1-201ENST00000612829 85 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 MIR1244-3-201ENST00000635744 85 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 MIR1244-2-201ENST00000636449 85 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 MIR1244-4-202ENST00000636813 85 ntBASIC1.52□□□□□ -2.17
RAB40CQ96S21 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
RAB40CQ96S21 MIR126-201ENST00000362291 85 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 SNORA33-201ENST00000363664 130 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 RNU6-879P-201ENST00000364328 108 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 RNU6-99P-201ENST00000364721 107 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 Y_RNA.287-201ENST00000364853 94 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 Y_RNA.303-201ENST00000364998 94 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 SNORA72.2-201ENST00000365028 127 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 Y_RNA.358-201ENST00000365491 99 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 MIR515-2-201ENST00000384883 83 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 MIR515-1-201ENST00000384884 83 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 SNORA75.6-201ENST00000391318 127 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms