Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.34□□□□□ -1.87
CITED4Q96RK1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.34□□□□□ -1.87
CITED4Q96RK1 Z96811.1-201ENST00000445880 108 ntBASIC3.34□□□□□ -1.87
CITED4Q96RK1 RNU6-1096P-201ENST00000517089 102 ntBASIC3.34□□□□□ -1.87
CITED4Q96RK1 IGLVIV-65-201ENST00000517313 360 ntBASIC3.34□□□□□ -1.87
CITED4Q96RK1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CITED4Q96RK1 MIR2681-201ENST00000581814 105 ntBASIC3.34□□□□□ -1.87
CITED4Q96RK1 MIR6844-201ENST00000637122 62 ntBASIC3.34□□□□□ -1.87
CITED4Q96RK1 AC100821.1-201ENST00000523153 2479 ntBASIC3.34□□□□□ -1.88
CITED4Q96RK1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CITED4Q96RK1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CITED4Q96RK1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CITED4Q96RK1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.33□□□□□ -1.88
CITED4Q96RK1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CITED4Q96RK1 SNORD45.3-201ENST00000363836 72 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 RNA5SP387-201ENST00000364226 106 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 RNU6-1072P-201ENST00000384703 107 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 RNU6-443P-201ENST00000384780 107 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 MIR569-201ENST00000385228 96 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 RNA5SP467-201ENST00000391274 118 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.33□□□□□ -1.88
CITED4Q96RK1 SNRPGP8-201ENST00000454064 226 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 RPL35AP15-201ENST00000468042 339 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.33□□□□□ -1.88
CITED4Q96RK1 AC034105.4-201ENST00000568304 277 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 AC007229.1-201ENST00000590455 412 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 AL449363.1-201ENST00000617815 186 ntBASIC3.33□□□□□ -1.88
CITED4Q96RK1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.33□□□□□ -1.88
CITED4Q96RK1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CITED4Q96RK1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
CITED4Q96RK1 ZNF702P-202ENST00000434269 1966 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CITED4Q96RK1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CITED4Q96RK1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CITED4Q96RK1 SNORD115-3-201ENST00000363100 82 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 SNORD114-6-201ENST00000364393 72 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 Y_RNA.291-201ENST00000364886 113 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 RNU6-81P-201ENST00000365608 104 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 SNORA20-201ENST00000384662 132 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CITED4Q96RK1 RNA5SP323-201ENST00000391094 133 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.32□□□□□ -1.88
CITED4Q96RK1 RPS27P1-201ENST00000450552 247 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 SNORA84-201ENST00000459229 133 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 AC006064.5-201ENST00000541782 248 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 AC112693.2-201ENST00000556538 232 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 AC093732.2-201ENST00000607950 274 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 JPX_2.1-201ENST00000614161 69 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CITED4Q96RK1 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
CITED4Q96RK1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CITED4Q96RK1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CITED4Q96RK1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CITED4Q96RK1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CITED4Q96RK1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.31□□□□□ -1.88
CITED4Q96RK1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CITED4Q96RK1 Y_RNA.99-201ENST00000363138 105 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 RNU6-160P-201ENST00000384591 107 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 RNA5SP317-201ENST00000410176 116 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 RNA5SP311-201ENST00000411290 116 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 RN7SKP101-201ENST00000411376 320 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 AC104389.3-201ENST00000445629 235 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 AC091167.1-201ENST00000492017 396 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 RNA5SP315-201ENST00000516340 116 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 RNU1-142P-201ENST00000516682 145 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 RNA5SP312-201ENST00000517068 116 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 AP003730.1-201ENST00000524605 285 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 CYCSP29-201ENST00000533731 318 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 AL359075.3-201ENST00000613288 217 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 MIR6891-201ENST00000618788 93 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 Z83843.1-201ENST00000604070 3685 ntBASIC3.31□□□□□ -1.88
CITED4Q96RK1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CITED4Q96RK1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CITED4Q96RK1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CITED4Q96RK1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CITED4Q96RK1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CITED4Q96RK1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CITED4Q96RK1 RNA5SP366-201ENST00000365454 123 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 RNU6-1117P-201ENST00000384525 104 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 RNU6-768P-201ENST00000384683 107 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 MIR520G-201ENST00000385064 90 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 MIR1179-201ENST00000408703 91 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 CYCSP49-201ENST00000420810 319 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 AC092427.1-202ENST00000430569 476 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 PHBP16-201ENST00000446318 950 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 RN7SL98P-201ENST00000462271 300 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.3□□□□□ -1.88
CITED4Q96RK1 AC110768.1-201ENST00000509222 400 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 RNU7-99P-201ENST00000516271 62 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 RNU6-1299P-201ENST00000516316 100 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 MIR4429-201ENST00000580105 73 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.3□□□□□ -1.88
CITED4Q96RK1 MIR3653-201ENST00000625572 110 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 MIR492-201ENST00000638676 116 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 AC010332.2-201ENST00000613083 1904 ntBASIC3.3□□□□□ -1.88
CITED4Q96RK1 Y_RNA.267-201ENST00000364679 109 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms