Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC068205.3-201ENST00000636385 468 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 MIR3674-201ENST00000636576 68 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.55□□□□□ -2
SNX18Q96RF0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
SNX18Q96RF0 MIR181A2-201ENST00000384863 110 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 MIR1294-201ENST00000408503 142 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 RNA5SP475-201ENST00000410568 110 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.54□□□□□ -2
SNX18Q96RF0 AC005042.3-201ENST00000453230 174 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.54□□□□□ -2
SNX18Q96RF0 RPL23AP94-201ENST00000512518 302 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 MIR4643-201ENST00000577473 78 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.54□□□□□ -2
SNX18Q96RF0 AL033523.1-201ENST00000605153 153 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 RPL17P51-201ENST00000605218 238 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 BX284668.6-201ENST00000606899 438 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.54□□□□□ -2
SNX18Q96RF0 AC138915.1-201ENST00000565427 1685 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.53□□□□□ -2
SNX18Q96RF0 SNORA25.1-201ENST00000362326 128 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 Y_RNA.44-201ENST00000362676 108 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 Y_RNA.269-201ENST00000364685 89 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 Y_RNA.418-201ENST00000384029 102 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RNU6-1310P-201ENST00000384153 107 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RNU2-14P-201ENST00000411053 191 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RPS29P26-201ENST00000477483 171 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RNU6-155P-201ENST00000516347 100 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.53□□□□□ -2
SNX18Q96RF0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.53□□□□□ -2
SNX18Q96RF0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.53□□□□□ -2
SNX18Q96RF0 AL590240.4-201ENST00000616908 390 ntBASIC2.53□□□□□ -2
SNX18Q96RF0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.53□□□□□ -2
SNX18Q96RF0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SNX18Q96RF0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2.01
SNX18Q96RF0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SNX18Q96RF0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNX18Q96RF0 AC092593.1-201ENST00000515413 1815 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SNX18Q96RF0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SNX18Q96RF0 MIR410-201ENST00000362222 80 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 RNU6-461P-201ENST00000364195 107 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 RNU6-514P-201ENST00000384208 107 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 AL161788.1-201ENST00000441805 169 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX18Q96RF0 CYP2C59P-201ENST00000457790 269 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX18Q96RF0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX18Q96RF0 RPL21P9-201ENST00000556149 474 ntBASIC2.52□□□□□ -2.01
SNX18Q96RF0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX18Q96RF0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX18Q96RF0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNX18Q96RF0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SNX18Q96RF0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SNX18Q96RF0 SNORA67.2-201ENST00000384300 149 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 RNU6-220P-201ENST00000390919 107 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 RNU6-1199P-201ENST00000411249 104 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.51□□□□□ -2.01
SNX18Q96RF0 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 MTCO1P5-201ENST00000433573 344 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 AC003982.1-202ENST00000469928 248 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 RNU6-138P-201ENST00000515952 107 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 MIR3145-201ENST00000580727 82 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 MIR3117-201ENST00000584034 78 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 AC009779.6-201ENST00000603972 165 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.51□□□□□ -2.01
SNX18Q96RF0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.51□□□□□ -2.01
SNX18Q96RF0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SNX18Q96RF0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.51□□□□□ -2.01
SNX18Q96RF0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
SNX18Q96RF0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNX18Q96RF0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNX18Q96RF0 RNU6-454P-201ENST00000364292 107 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 RNU6-740P-201ENST00000364734 105 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SNX18Q96RF0 SNORD58.1-201ENST00000391313 66 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNX18Q96RF0 RNU2-54P-201ENST00000410299 190 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 RNU2-63P-201ENST00000410792 194 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 AC009963.1-201ENST00000417265 157 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 MTND5P15-201ENST00000434246 349 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 AC091959.1-201ENST00000495857 238 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.5□□□□□ -2.01
SNX18Q96RF0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.5□□□□□ -2.01
SNX18Q96RF0 AC091826.1-201ENST00000514065 313 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 RNU4-71P-201ENST00000516258 113 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 GTF3AP2-201ENST00000557014 266 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 AC130289.1-201ENST00000577321 73 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 MIR3616-201ENST00000584070 92 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms