Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 AC010889.1-201ENST00000566193 2666 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-1205P-201ENST00000363625 106 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 SNORA72.4-201ENST00000384174 132 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 SNORA7.4-201ENST00000384249 137 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-198P-201ENST00000384258 104 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 RNA5SP201-201ENST00000410316 124 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 RNA5SP229-201ENST00000410809 99 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 HMGN2P16-201ENST00000456802 261 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 snoU13.23-201ENST00000458863 104 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 SNORD19.2-201ENST00000516978 73 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 MIR2682-201ENST00000580305 110 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SYNGAP1Q96PV0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 AL136360.1-201ENST00000503377 1900 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 TOMM22P2-201ENST00000430735 237 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 HMGN2P20-201ENST00000437531 273 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 HSPE1P21-201ENST00000438283 308 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 AL137159.1-201ENST00000452808 512 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 AC091179.1-201ENST00000461606 579 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-1333P-201ENST00000516162 93 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 MIR2276-201ENST00000516886 89 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 AC109810.1-201ENST00000534066 224 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 uc_338.1-201ENST00000612113 180 ntBASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.66□□□□□ -1.82
SYNGAP1Q96PV0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SYNGAP1Q96PV0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 AC068700.1-201ENST00000565862 3754 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-655P-201ENST00000362858 107 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-1305P-201ENST00000364353 104 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.337-201ENST00000365312 102 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 SNORA12-201ENST00000391162 147 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 MTND4LP9-201ENST00000427694 174 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 AC010099.1-201ENST00000455434 375 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-1234P-201ENST00000516877 103 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 AL670379.2-201ENST00000604983 252 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-91P-201ENST00000607774 107 ntBASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.65□□□□□ -1.83
SYNGAP1Q96PV0 AL136164.4-201ENST00000625013 2135 ntBASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-482P-201ENST00000391068 107 ntBASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 RNA5SP504-201ENST00000410676 117 ntBASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 AIMP1P2-201ENST00000425294 312 ntBASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 RNU7-141P-201ENST00000459304 62 ntBASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 SRIP1-201ENST00000489235 288 ntBASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 SCARNA8-201ENST00000515924 131 ntBASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 RNU7-121P-201ENST00000516604 62 ntBASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 AL391813.1-201ENST00000603098 260 ntBASIC3.64□□□□□ -1.83
SYNGAP1Q96PV0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 AC069528.2-201ENST00000624849 1991 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 MIR367-201ENST00000362299 68 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.226-201ENST00000364337 114 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 RNU6-376P-201ENST00000384731 106 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 MT-TT-201ENST00000387460 66 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 RNA5SP508-201ENST00000411327 119 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 AC245291.1-201ENST00000419501 328 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 HMGN1P18-201ENST00000457642 277 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 RPL36AP48-201ENST00000485521 314 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 AC008885.1-201ENST00000514930 301 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 AC011603.4-201ENST00000611325 277 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 U6.115-201ENST00000636045 103 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 U6.98-201ENST00000637157 84 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 MIR622-201ENST00000638396 96 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 AC080128.1-201ENST00000474389 1917 ntBASIC3.63□□□□□ -1.83
SYNGAP1Q96PV0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.71-201ENST00000362892 104 ntBASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.243-201ENST00000364481 109 ntBASIC3.62□□□□□ -1.83
SYNGAP1Q96PV0 Y_RNA.420-201ENST00000384043 110 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms