Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 ATP5J2P3-201ENST00000451550 258 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 RNU6-475P-201ENST00000516073 104 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 RN7SKP295-201ENST00000517264 153 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 HSBP1P1-201ENST00000555205 166 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC138Q96M89 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC138Q96M89 SNORD58B-201ENST00000607313 66 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 AC007485.1-201ENST00000616755 206 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 IGHVIII-44-202ENST00000636235 289 ntBASIC2.4□□□□□ -2.03
CCDC138Q96M89 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 MIR518C-201ENST00000384822 101 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 RNU6-308P-201ENST00000390957 107 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CCDC138Q96M89 AC060773.1-201ENST00000421698 310 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 PMCHL1-202ENST00000423102 261 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 MTND4P19-201ENST00000446659 478 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 FCF1P4-201ENST00000448326 183 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC138Q96M89 RNU6-625P-201ENST00000459412 107 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 AC011406.1-201ENST00000512440 370 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 Y_RNA.701-201ENST00000516812 110 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 AC025647.1-201ENST00000517879 253 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC138Q96M89 GNAI2P1-201ENST00000541815 315 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 MIR5188-201ENST00000583467 113 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 AC005336.3-201ENST00000623833 2679 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 AC245060.5-201ENST00000610778 3293 ntBASIC2.39□□□□□ -2.03
CCDC138Q96M89 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC138Q96M89 Y_RNA.28-201ENST00000362554 111 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 Y_RNA.138-201ENST00000363462 102 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 XGY1-201ENST00000381172 446 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 AL359511.1-201ENST00000402970 211 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC138Q96M89 SNORA25.10-201ENST00000515926 124 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 RNU6-1041P-201ENST00000516254 102 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 RNU6-1012P-201ENST00000516606 109 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 RPS29P30-201ENST00000600975 111 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 MIR6840-201ENST00000611937 71 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 AC006001.4-201ENST00000622243 395 ntBASIC2.38□□□□□ -2.03
CCDC138Q96M89 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC138Q96M89 AC008555.8-201ENST00000623602 2168 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC138Q96M89 Y_RNA.80-201ENST00000362996 102 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 RNU4-76P-201ENST00000364509 141 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 RNU6-1240P-201ENST00000365155 104 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 RNU6-926P-201ENST00000384075 107 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 RNU6-708P-201ENST00000384217 107 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 Y_RNA.485-201ENST00000384395 102 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 Y_RNA.526-201ENST00000384572 110 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 AL355497.1-201ENST00000406262 551 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 MIR548P-201ENST00000408336 84 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC138Q96M89 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC138Q96M89 AL513328.1-201ENST00000446460 224 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC138Q96M89 RNU6-408P-201ENST00000515910 100 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 RNU6-1146P-201ENST00000516282 102 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 RNU6-988P-201ENST00000519081 107 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 MIR4524B-201ENST00000581569 115 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.15-201ENST00000611544 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.16-201ENST00000613119 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.12-201ENST00000613778 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.20-201ENST00000613956 192 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.9-201ENST00000615427 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.11-201ENST00000616345 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.2-201ENST00000616535 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.3-201ENST00000617785 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.19-201ENST00000618602 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 RNU2-1-201ENST00000618664 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.6-201ENST00000619225 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.5-201ENST00000619465 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 U2.10-201ENST00000620268 191 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 MIR7843-201ENST00000622274 79 ntBASIC2.37□□□□□ -2.03
CCDC138Q96M89 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC138Q96M89 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC138Q96M89 ZNF702P-202ENST00000434269 1966 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 MIR410-201ENST00000362222 80 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 RNU6-1266P-201ENST00000362794 105 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 RNU6-1310P-201ENST00000384153 107 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 SNORA48.1-201ENST00000390879 135 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 MIR1302-11-201ENST00000408051 138 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 MIR1253-201ENST00000408273 105 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 MIR1302-9-201ENST00000408365 138 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 MIR1302-10-201ENST00000408734 138 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 RNA5SP475-201ENST00000410568 110 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 RNA5SP501-201ENST00000410990 112 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 AC096920.1-201ENST00000423991 241 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 TRBV12-1-201ENST00000479785 344 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 AC093852.1-201ENST00000503587 266 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 MIR1302-2-201ENST00000607096 138 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 AL353149.1-201ENST00000610667 244 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 AL162373.1-201ENST00000620433 407 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC138Q96M89 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC138Q96M89 AC016717.2-201ENST00000609089 5141 ntBASIC2.36□□□□□ -2.03
CCDC138Q96M89 AC005592.1-201ENST00000566527 1640 ntBASIC2.35□□□□□ -2.03
CCDC138Q96M89 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms