Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC097473.1-201ENST00000508142 408 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.17□□□□□ -2.22
LINC00477Q96M19 RNU6-1041P-201ENST00000516254 102 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 Y_RNA.675-201ENST00000516389 149 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 AL121579.1-201ENST00000555129 305 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC00477Q96M19 MIR5695-201ENST00000579717 85 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 TCL6_2.1-201ENST00000615162 119 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 AC126177.8-201ENST00000618339 1015 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 AC092794.2-201ENST00000620933 563 ntBASIC1.17□□□□□ -2.22
LINC00477Q96M19 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LINC00477Q96M19 RNU6-862P-201ENST00000362804 105 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 Y_RNA.142-201ENST00000363491 102 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 SNORD115-32-201ENST00000364079 82 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 RNU6-1305P-201ENST00000364353 104 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 RNU6-99P-201ENST00000364721 107 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 RNU6-890P-201ENST00000384121 107 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 Y_RNA.482-201ENST00000384377 111 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 MIR517C-201ENST00000385103 95 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
LINC00477Q96M19 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
LINC00477Q96M19 RNU6-159P-201ENST00000391080 106 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 AL139396.1-201ENST00000421137 167 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 AC245047.4-201ENST00000433189 144 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
LINC00477Q96M19 AC010095.1-201ENST00000443543 144 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 RPL31P58-201ENST00000469001 379 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 AC105758.1-201ENST00000506038 399 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 RNU1-41P-201ENST00000516161 162 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 RNU1-48P-201ENST00000516400 162 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 SNORA25.14-201ENST00000516481 132 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 SNORA25.15-201ENST00000516487 89 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 Y_RNA.708-201ENST00000516950 96 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 RNA5SP437-201ENST00000517249 129 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC00477Q96M19 AC091144.1-201ENST00000519573 138 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 AL590705.4-201ENST00000532209 134 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.16□□□□□ -2.22
LINC00477Q96M19 MIR5094-201ENST00000578766 85 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 PRR13P7-201ENST00000605538 430 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 AL022345.1-201ENST00000607292 135 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC00477Q96M19 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.16□□□□□ -2.22
LINC00477Q96M19 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LINC00477Q96M19 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC00477Q96M19 RNY1P16-201ENST00000363063 111 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 RNU1-42P-201ENST00000364033 160 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 Y_RNA.287-201ENST00000364853 94 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 RNU6-438P-201ENST00000365561 103 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 RNU6-281P-201ENST00000384212 103 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 RNU6-708P-201ENST00000384217 107 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 RNU6-318P-201ENST00000384283 103 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 RNU6-975P-201ENST00000384296 105 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 RNU6-296P-201ENST00000384608 107 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 Y_RNA.557-201ENST00000384680 107 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 RNU1-78P-201ENST00000391248 165 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 MIR1304-201ENST00000408243 91 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 MIR1289-2-201ENST00000408360 111 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 MTATP6P23-201ENST00000440153 476 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC00477Q96M19 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 AL606517.2-201ENST00000442855 241 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC00477Q96M19 SUB1P4-201ENST00000566062 339 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 AL355375.2-201ENST00000574825 175 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 MIR548S-201ENST00000581352 82 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC00477Q96M19 BX248123.2-201ENST00000606318 124 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 AC087588.2-201ENST00000617667 426 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 AC104985.2-201ENST00000620598 500 ntBASIC1.15□□□□□ -2.23
LINC00477Q96M19 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LINC00477Q96M19 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
LINC00477Q96M19 AL159152.1-201ENST00000635019 2587 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
LINC00477Q96M19 Y_RNA.67-201ENST00000362870 100 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 Y_RNA.358-201ENST00000365491 99 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 SNORD26-201ENST00000384147 75 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 RNU6-160P-201ENST00000384591 107 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 MIR559-201ENST00000385188 96 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 MIR153-2-201ENST00000385225 87 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 SNORA48.1-201ENST00000390879 135 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 RNU6-57P-201ENST00000411348 103 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC00477Q96M19 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC00477Q96M19 EIF1P2-201ENST00000428233 350 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC096644.2-201ENST00000429278 159 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC132942.1-201ENST00000486753 483 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 YWHAEP4-201ENST00000505390 198 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 Y_RNA.661-201ENST00000516003 99 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 RNU6-559P-201ENST00000516151 98 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 RNU6-966P-201ENST00000516479 104 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 RNU6-295P-201ENST00000516901 104 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 SNORA31.17-201ENST00000516953 127 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 RNU6-856P-201ENST00000516959 98 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC055872.1-201ENST00000570978 278 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms