Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.7□□□□□ -1.98
HPS3Q969F9 MIR1261-201ENST00000408659 82 ntBASIC2.7□□□□□ -1.98
HPS3Q969F9 RNA5SP475-201ENST00000410568 110 ntBASIC2.7□□□□□ -1.98
HPS3Q969F9 RNA5SP504-201ENST00000410676 117 ntBASIC2.7□□□□□ -1.98
HPS3Q969F9 AC123900.1-201ENST00000420390 96 ntBASIC2.7□□□□□ -1.98
HPS3Q969F9 RNU6-948P-201ENST00000516374 107 ntBASIC2.7□□□□□ -1.98
HPS3Q969F9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.7□□□□□ -1.98
HPS3Q969F9 PRELID2P1-201ENST00000552837 301 ntBASIC2.7□□□□□ -1.98
HPS3Q969F9 AC091544.4-201ENST00000555268 342 ntBASIC2.7□□□□□ -1.98
HPS3Q969F9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.7□□□□□ -1.98
HPS3Q969F9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
HPS3Q969F9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HPS3Q969F9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HPS3Q969F9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 Y_RNA.153-201ENST00000363615 91 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 Y_RNA.210-201ENST00000364161 110 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 RNU6-1264P-201ENST00000383891 107 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 AL079342.1-201ENST00000401460 267 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 ELOCP21-201ENST00000412558 336 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 TOMM22P2-201ENST00000430735 237 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 AL121890.1-201ENST00000435457 205 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.69□□□□□ -1.98
HPS3Q969F9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.69□□□□□ -1.98
HPS3Q969F9 AL513328.1-201ENST00000446460 224 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 RNU7-57P-201ENST00000459540 60 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 RNU6-1143P-201ENST00000516125 104 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 RNU6-397P-201ENST00000516226 104 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 RNU2-34P-201ENST00000516534 121 ntBASIC2.69□□□□□ -1.98
HPS3Q969F9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.69□□□□□ -1.98
HPS3Q969F9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.69□□□□□ -1.98
HPS3Q969F9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.69□□□□□ -1.98
HPS3Q969F9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 RNU6-626P-201ENST00000363354 107 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 Y_RNA.183-201ENST00000363882 113 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 Y_RNA.276-201ENST00000364732 109 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 SNORA72.2-201ENST00000365028 127 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 RNU6-975P-201ENST00000384296 105 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 RAB28P5-201ENST00000427490 651 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.68□□□□□ -1.98
HPS3Q969F9 MRPS35P2-201ENST00000508242 191 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.68□□□□□ -1.98
HPS3Q969F9 AC005034.5-201ENST00000604219 466 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 RAC1P9-201ENST00000604990 392 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 U4.3-201ENST00000621047 82 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.68□□□□□ -1.98
HPS3Q969F9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HPS3Q969F9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.67□□□□□ -1.98
HPS3Q969F9 AC009487.4-201ENST00000624969 3585 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 Y_RNA.230-201ENST00000364348 109 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 SNORA70B-201ENST00000384210 135 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 RNU1-148P-201ENST00000384472 162 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 MIR548B-201ENST00000385247 97 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 RPL26P26-201ENST00000480251 434 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 RNU6-897P-201ENST00000517135 105 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 AC005176.2-201ENST00000596933 147 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 AC046143.2-201ENST00000609789 160 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 AL590808.1-201ENST00000618696 141 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.67□□□□□ -1.98
HPS3Q969F9 MIR3674-201ENST00000636576 68 ntBASIC2.67□□□□□ -1.98
HPS3Q969F9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.66□□□□□ -1.98
HPS3Q969F9 Y_RNA.143-201ENST00000363520 106 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 RNU6-961P-201ENST00000363893 105 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 RNU6-20P-201ENST00000384106 107 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 Y_RNA.462-201ENST00000384268 102 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 AL359511.1-201ENST00000402970 211 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 RNU5A-5P-201ENST00000411054 116 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 AL390729.2-201ENST00000416137 156 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.66□□□□□ -1.98
HPS3Q969F9 UBL5P3-201ENST00000475112 231 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 AC010655.3-201ENST00000478818 450 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 YWHAEP4-201ENST00000505390 198 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 AC026436.1-201ENST00000510537 270 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 AK6P2-201ENST00000549020 471 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 snoZ196.1-201ENST00000625269 89 ntBASIC2.66□□□□□ -1.98
HPS3Q969F9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.66□□□□□ -1.98
HPS3Q969F9 MIR410-201ENST00000362222 80 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 RNU6-418P-201ENST00000384035 107 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 SNORD14D-201ENST00000384390 87 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 RNU6-1235P-201ENST00000384559 107 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 MIR524-201ENST00000385242 87 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 snosnR66.1-201ENST00000391095 99 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 RNA5SP181-201ENST00000410246 98 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 RNU6-130P-201ENST00000411112 103 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 RNU6-498P-201ENST00000459468 107 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 RNY3P15-201ENST00000516297 97 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 AC121758.2-201ENST00000553271 193 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.65□□□□□ -1.99
HPS3Q969F9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.65□□□□□ -1.99
HPS3Q969F9 PRR13P7-201ENST00000605538 430 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 AC130454.1-201ENST00000622948 401 ntBASIC2.65□□□□□ -1.99
HPS3Q969F9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HPS3Q969F9 ZNF271P-202ENST00000465539 1970 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 LINC02555-201ENST00000563933 1951 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 RNU6-770P-201ENST00000363929 105 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 RNU6-160P-201ENST00000384591 107 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 MIR1185-2-201ENST00000408687 86 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 AC139712.2-201ENST00000424302 339 ntBASIC2.64□□□□□ -1.99
HPS3Q969F9 AL357134.1-201ENST00000445848 426 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms