Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-CQ95604 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-CQ95604 AL589743.1-201ENST00000551932 2712 ntBASIC4.13□□□□□ -1.75
HLA-CQ95604 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HLA-CQ95604 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-CQ95604 RNA5SP50-201ENST00000363731 107 ntBASIC4.13□□□□□ -1.75
HLA-CQ95604 RNU6-1014P-201ENST00000383940 103 ntBASIC4.13□□□□□ -1.75
HLA-CQ95604 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.13□□□□□ -1.75
HLA-CQ95604 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-CQ95604 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-CQ95604 RN7SL807P-201ENST00000470923 297 ntBASIC4.13□□□□□ -1.75
HLA-CQ95604 SCARNA14-201ENST00000516903 136 ntBASIC4.13□□□□□ -1.75
HLA-CQ95604 RNU6-1096P-201ENST00000517089 102 ntBASIC4.13□□□□□ -1.75
HLA-CQ95604 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-CQ95604 YPEL5P3-201ENST00000547227 352 ntBASIC4.13□□□□□ -1.75
HLA-CQ95604 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HLA-CQ95604 GABRG2-229ENST00000641017 3628 ntBASIC4.13□□□□□ -1.75
HLA-CQ95604 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-CQ95604 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-CQ95604 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-CQ95604 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-CQ95604 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-CQ95604 RNU6-1077P-201ENST00000410506 102 ntBASIC4.12□□□□□ -1.75
HLA-CQ95604 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-CQ95604 HMGN1P7-201ENST00000491722 313 ntBASIC4.12□□□□□ -1.75
HLA-CQ95604 MRPS17P9-201ENST00000511924 393 ntBASIC4.12□□□□□ -1.75
HLA-CQ95604 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.12□□□□□ -1.75
HLA-CQ95604 RN7SKP282-201ENST00000516824 299 ntBASIC4.12□□□□□ -1.75
HLA-CQ95604 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.12□□□□□ -1.75
HLA-CQ95604 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-CQ95604 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-CQ95604 AL049781.1-201ENST00000623195 3585 ntBASIC4.12□□□□□ -1.75
HLA-CQ95604 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-CQ95604 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-CQ95604 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HLA-CQ95604 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-CQ95604 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-CQ95604 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-CQ95604 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-CQ95604 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-CQ95604 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-CQ95604 MAPK10-303ENST00000641324 3959 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-CQ95604 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
HLA-CQ95604 RNY4P6-201ENST00000363667 96 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 RNA5SP146-201ENST00000410743 123 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 EDDM3CP-201ENST00000415977 425 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 AL513477.1-202ENST00000417061 214 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 RPS26P2-201ENST00000440331 348 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 NDUFA4P2-201ENST00000489989 244 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-CQ95604 RNU6-970P-201ENST00000516312 107 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 RN7SKP83-201ENST00000516512 178 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 MIR8058-201ENST00000615737 89 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-CQ95604 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-CQ95604 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-CQ95604 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-CQ95604 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-CQ95604 AL355596.1-201ENST00000565399 3996 ntBASIC4.11□□□□□ -1.75
HLA-CQ95604 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-CQ95604 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-CQ95604 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-CQ95604 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-CQ95604 Y_RNA.198-201ENST00000364013 98 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 SNORD61-201ENST00000384252 73 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 RNY4P29-201ENST00000410801 97 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 RPS26P48-201ENST00000491713 339 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 SNORA4.4-201ENST00000515921 135 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 RNU6-1146P-201ENST00000516282 102 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 RNU6-1149P-201ENST00000516810 97 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 SCARNA15-202ENST00000516881 127 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 Y_RNA.714-201ENST00000517065 90 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 RNU6-158P-201ENST00000517104 100 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 SCARNA11.3-201ENST00000517276 130 ntBASIC4.1□□□□□ -1.75
HLA-CQ95604 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-CQ95604 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-CQ95604 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-CQ95604 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-CQ95604 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-CQ95604 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-CQ95604 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-CQ95604 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-CQ95604 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-CQ95604 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-CQ95604 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HLA-CQ95604 AC068647.1-201ENST00000489539 2265 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HLA-CQ95604 RNA5SP399-201ENST00000364003 117 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 RNA5SP51-201ENST00000364750 119 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 MIR490-201ENST00000384865 128 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 MIR708-201ENST00000390708 88 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 RPS3AP1-201ENST00000413190 320 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 HMGN2P32-201ENST00000444648 269 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 RPL39P34-201ENST00000477141 156 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 RNA5SP309-201ENST00000516670 106 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 RNU7-143P-201ENST00000516781 65 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 RNU6-856P-201ENST00000516959 98 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 AL358944.1-201ENST00000528537 144 ntBASIC4.09□□□□□ -1.75
HLA-CQ95604 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms