Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.78
HPS1Q92902 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HPS1Q92902 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HPS1Q92902 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
HPS1Q92902 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.9□□□□□ -1.78
HPS1Q92902 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.9□□□□□ -1.78
HPS1Q92902 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HPS1Q92902 RNU6-832P-201ENST00000363319 107 ntBASIC3.9□□□□□ -1.79
HPS1Q92902 RNU1-63P-201ENST00000383902 164 ntBASIC3.9□□□□□ -1.79
HPS1Q92902 Y_RNA.531-201ENST00000384589 121 ntBASIC3.9□□□□□ -1.79
HPS1Q92902 BTF3P4-201ENST00000418852 495 ntBASIC3.9□□□□□ -1.79
HPS1Q92902 MRPL35P3-201ENST00000421557 364 ntBASIC3.9□□□□□ -1.79
HPS1Q92902 SNRPGP10-201ENST00000432323 225 ntBASIC3.9□□□□□ -1.79
HPS1Q92902 AC078918.1-201ENST00000498515 228 ntBASIC3.9□□□□□ -1.79
HPS1Q92902 RNU7-6P-201ENST00000516845 62 ntBASIC3.9□□□□□ -1.79
HPS1Q92902 RNU6-1231P-201ENST00000517185 103 ntBASIC3.9□□□□□ -1.79
HPS1Q92902 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS1Q92902 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.9□□□□□ -1.79
HPS1Q92902 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HPS1Q92902 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HPS1Q92902 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HPS1Q92902 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HPS1Q92902 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HPS1Q92902 AC010889.1-201ENST00000566193 2666 ntBASIC3.89□□□□□ -1.79
HPS1Q92902 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HPS1Q92902 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.89□□□□□ -1.79
HPS1Q92902 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS1Q92902 SNORD31B-201ENST00000364977 69 ntBASIC3.89□□□□□ -1.79
HPS1Q92902 MIR607-201ENST00000385241 96 ntBASIC3.89□□□□□ -1.79
HPS1Q92902 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.89□□□□□ -1.79
HPS1Q92902 AC113410.1-201ENST00000505029 247 ntBASIC3.89□□□□□ -1.79
HPS1Q92902 RNU6-1096P-201ENST00000517089 102 ntBASIC3.89□□□□□ -1.79
HPS1Q92902 AC079598.5-201ENST00000547460 117 ntBASIC3.89□□□□□ -1.79
HPS1Q92902 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS1Q92902 MIR4305-201ENST00000583252 102 ntBASIC3.89□□□□□ -1.79
HPS1Q92902 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HPS1Q92902 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
HPS1Q92902 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HPS1Q92902 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HPS1Q92902 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HPS1Q92902 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HPS1Q92902 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.88□□□□□ -1.79
HPS1Q92902 Y_RNA.190-201ENST00000363964 101 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 RNU6-1189P-201ENST00000383958 107 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 Y_RNA.454-201ENST00000384224 113 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 MIR520G-201ENST00000385064 90 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 MIR577-201ENST00000385196 96 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 RN7SKP156-201ENST00000410308 342 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 AL159169.1-201ENST00000421119 127 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 RNU1-131P-201ENST00000458943 161 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 AC112771.1-201ENST00000463581 102 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 PPIAP15-201ENST00000479662 484 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 RN7SL703P-201ENST00000578485 302 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 MIR3683-201ENST00000580847 82 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 MIR3609-201ENST00000582661 80 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HPS1Q92902 MIR6830-201ENST00000636015 70 ntBASIC3.88□□□□□ -1.79
HPS1Q92902 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.88□□□□□ -1.79
HPS1Q92902 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.88□□□□□ -1.79
HPS1Q92902 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HPS1Q92902 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HPS1Q92902 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HPS1Q92902 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.87□□□□□ -1.79
HPS1Q92902 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.87□□□□□ -1.79
HPS1Q92902 RNU6-60P-201ENST00000364792 103 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 MIR1294-201ENST00000408503 142 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 SNORA3C-201ENST00000408792 125 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 RNU2-49P-201ENST00000410666 184 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.87□□□□□ -1.79
HPS1Q92902 RPS12P10-201ENST00000427031 377 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 RNA5SP309-201ENST00000516670 106 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 RNU7-70P-201ENST00000516941 66 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.87□□□□□ -1.79
HPS1Q92902 AC087685.1-201ENST00000587507 141 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 MIR6716-201ENST00000613413 80 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 U7.8-201ENST00000619968 63 ntBASIC3.87□□□□□ -1.79
HPS1Q92902 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.87□□□□□ -1.79
HPS1Q92902 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.87□□□□□ -1.79
HPS1Q92902 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HPS1Q92902 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.86□□□□□ -1.79
HPS1Q92902 AL021368.2-201ENST00000606125 5352 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HPS1Q92902 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
HPS1Q92902 RNA5SP509-201ENST00000364577 119 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 Y_RNA.360-201ENST00000365512 102 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 RNA5SP129-201ENST00000410276 118 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 Y_RNA.620-201ENST00000411009 88 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 AL356387.2-201ENST00000422272 243 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 RPEP3-201ENST00000425462 676 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.86□□□□□ -1.79
HPS1Q92902 MIR449C-201ENST00000516047 92 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 RN7SKP289-201ENST00000517244 295 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 AC105129.1-201ENST00000560250 297 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 MIR4777-201ENST00000583710 86 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 MIR548Z-201ENST00000584743 97 ntBASIC3.86□□□□□ -1.79
HPS1Q92902 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HPS1Q92902 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HPS1Q92902 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HPS1Q92902 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HPS1Q92902 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms