Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNA5SP425-201ENST00000410336 112 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 EDDM3CP-201ENST00000415977 425 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 AL445305.1-201ENST00000432577 575 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 AL160004.2-201ENST00000432935 350 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 HMGN2P18-201ENST00000450680 270 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 AL137159.1-201ENST00000452808 512 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 ANP32BP3-201ENST00000559213 706 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 AC068205.3-201ENST00000636385 468 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 AC005592.1-201ENST00000566527 1640 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
SLC44A1Q8WWI5 RNA5SP361-201ENST00000362686 118 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.526-201ENST00000384572 110 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 SNORD23.1-201ENST00000408212 104 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 RNA5SP504-201ENST00000410676 117 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 AC096644.2-201ENST00000429278 159 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 HMGN2P9-201ENST00000476875 229 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 RNU6-991P-201ENST00000516168 107 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 RNA5SP137-201ENST00000516833 135 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 RRN3P3-201ENST00000549207 578 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 AC026271.5-201ENST00000577873 130 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 MZT1P2-201ENST00000604387 248 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 AC022202.1-201ENST00000613515 211 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 MTND5P35-201ENST00000557537 1720 ntBASIC2.07□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.132-201ENST00000363421 102 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 MRPL42P3-201ENST00000401492 326 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.595-201ENST00000410403 105 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 RN7SKP223-201ENST00000410582 62 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 AC123900.1-201ENST00000420390 96 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 AC010095.1-201ENST00000443543 144 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 RPS29P21-201ENST00000496272 170 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 AC087441.2-201ENST00000529141 262 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 AC233702.2-202ENST00000562547 291 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.06□□□□□ -2.08
SLC44A1Q8WWI5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 SNORA63-201ENST00000363450 132 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.158-201ENST00000363651 101 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 RNU6-743P-201ENST00000364151 106 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.216-201ENST00000364205 93 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.326-201ENST00000365176 113 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 RNU6-438P-201ENST00000365561 103 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 MRPL35P1-201ENST00000404272 572 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AL135786.1-201ENST00000415892 214 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AC245102.2-201ENST00000448956 180 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AC114982.1-201ENST00000469402 321 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AC074133.1-201ENST00000515696 183 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 RNU6-1012P-201ENST00000516606 109 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AP003072.1-201ENST00000531740 145 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.05□□□□□ -2.08
SLC44A1Q8WWI5 RNU6-545P-201ENST00000362681 104 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 U3.8-201ENST00000363675 217 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 SNORA33.2-201ENST00000365413 134 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.415-201ENST00000384012 112 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 SNORD14D-201ENST00000384390 87 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 SNORD78.2-201ENST00000391076 69 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 AL033519.2-201ENST00000403958 392 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 MIR1262-201ENST00000408276 93 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 SNORD12B-201ENST00000410433 91 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 AL139156.1-201ENST00000412785 841 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 DPH3P2-201ENST00000422618 250 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 SDAD1P3-201ENST00000427380 333 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 AL356320.1-201ENST00000429616 163 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 FCF1P4-201ENST00000448326 183 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 RNA5SP233-201ENST00000459153 113 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 YWHAEP4-201ENST00000505390 198 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 RNU2-34P-201ENST00000516534 121 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 AC022616.4-201ENST00000522985 181 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 HSBP1P1-201ENST00000555205 166 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 MIR4753-201ENST00000585119 83 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 AC016925.2-201ENST00000605108 242 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 AC091932.3-201ENST00000624223 323 ntBASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SLC44A1Q8WWI5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms