Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RNU4-67P-201ENST00000364569 141 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 RNA5SP39-201ENST00000411245 120 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 AC004552.1-201ENST00000419089 348 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCD2Q8WV60 RPL23AP46-201ENST00000438548 490 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 AP001486.1-201ENST00000463339 476 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 RPS26P3-201ENST00000470205 348 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 AC090543.2-201ENST00000483963 348 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 AC004057.1-201ENST00000485827 348 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTCD2Q8WV60 AC091544.4-201ENST00000555268 342 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 MIR4284-201ENST00000578924 81 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 AC079587.1-201ENST00000603846 277 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 AP005019.3-201ENST00000620418 560 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCD2Q8WV60 MIR1255B1-201ENST00000636325 63 ntBASIC4.44□□□□□ -1.7
PTCD2Q8WV60 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PTCD2Q8WV60 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCD2Q8WV60 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 RNU1-15P-201ENST00000353977 144 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 RNA5SP509-201ENST00000364577 119 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 RNU6-219P-201ENST00000364728 107 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 RNU4-16P-201ENST00000364737 141 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 SNORA14A-201ENST00000364773 135 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 Y_RNA.547-201ENST00000384654 119 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 MIR522-201ENST00000385071 87 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 MIR605-201ENST00000385078 83 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 AL356387.2-201ENST00000422272 243 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 RPS12P18-201ENST00000442381 270 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 ABCF2P2-201ENST00000450549 296 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 RNU6-341P-201ENST00000516973 96 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 AL358944.1-201ENST00000528537 144 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 MIR4777-201ENST00000583710 86 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 AL513534.2-201ENST00000603836 250 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 AC091932.4-201ENST00000623386 200 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 MIR6079-201ENST00000635807 62 ntBASIC4.43□□□□□ -1.7
PTCD2Q8WV60 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD2Q8WV60 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCD2Q8WV60 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.42□□□□□ -1.7
PTCD2Q8WV60 HMGN2P16-201ENST00000456802 261 ntBASIC4.42□□□□□ -1.7
PTCD2Q8WV60 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.42□□□□□ -1.7
PTCD2Q8WV60 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.42□□□□□ -1.7
PTCD2Q8WV60 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.42□□□□□ -1.7
PTCD2Q8WV60 HSPE1P19-201ENST00000603327 295 ntBASIC4.42□□□□□ -1.7
PTCD2Q8WV60 AC064859.1-201ENST00000624741 174 ntBASIC4.42□□□□□ -1.7
PTCD2Q8WV60 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTCD2Q8WV60 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCD2Q8WV60 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.42□□□□□ -1.7
PTCD2Q8WV60 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
PTCD2Q8WV60 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCD2Q8WV60 RNU6-1084P-201ENST00000362498 107 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 SNORD115-19-201ENST00000363098 82 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 SNORD115-18-201ENST00000363293 82 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 SNORD115-17-201ENST00000364612 82 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 RNU6-887P-201ENST00000410660 100 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 MIR1911-201ENST00000410783 80 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.41□□□□□ -1.7
PTCD2Q8WV60 AC025445.1-201ENST00000502728 300 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 Y_RNA.659-201ENST00000515994 113 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 AP003484.1-201ENST00000530974 250 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 MIR4668-201ENST00000582284 70 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 Y_RNA.773-201ENST00000607168 90 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTCD2Q8WV60 MIR1248-201ENST00000629190 106 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCD2Q8WV60 AP003122.5-201ENST00000527668 3766 ntBASIC4.41□□□□□ -1.7
PTCD2Q8WV60 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTCD2Q8WV60 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTCD2Q8WV60 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTCD2Q8WV60 MIR342-201ENST00000362212 99 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 RNU6-652P-201ENST00000365488 107 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 Y_RNA.611-201ENST00000410682 108 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.4□□□□□ -1.71
PTCD2Q8WV60 RPS29P17-201ENST00000430795 166 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 AC244505.4-201ENST00000434905 287 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 SSXP5-201ENST00000443473 287 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 AL049830.1-201ENST00000468034 425 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 PPIAP15-201ENST00000479662 484 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 RNU6-1018P-201ENST00000516577 106 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 SNORA31.21-201ENST00000517180 77 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.4□□□□□ -1.71
PTCD2Q8WV60 MIR6830-201ENST00000636015 70 ntBASIC4.4□□□□□ -1.71
PTCD2Q8WV60 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTCD2Q8WV60 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms