Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.19□□□□□ -2.22
RNF139Q8WU17 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.19□□□□□ -2.22
RNF139Q8WU17 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.19□□□□□ -2.22
RNF139Q8WU17 AC007215.1-201ENST00000464893 276 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 AC114982.1-201ENST00000469402 321 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 RPL23AP75-201ENST00000491601 451 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 HMGN1P7-201ENST00000491722 313 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 MTND1P5-201ENST00000517906 940 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.19□□□□□ -2.22
RNF139Q8WU17 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.19□□□□□ -2.22
RNF139Q8WU17 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.19□□□□□ -2.22
RNF139Q8WU17 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.19□□□□□ -2.22
RNF139Q8WU17 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.19□□□□□ -2.22
RNF139Q8WU17 MIR4753-201ENST00000585119 83 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 AC005562.2-201ENST00000618264 111 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 AC090617.10-201ENST00000624308 134 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 Y_RNA.212-201ENST00000364177 102 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 RNU6-534P-201ENST00000364877 106 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 RNU6-933P-201ENST00000384424 107 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
RNF139Q8WU17 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 AC004386.2-201ENST00000441858 148 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 AC091435.1-201ENST00000505442 584 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 RNU6-1146P-201ENST00000516282 102 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 AC026470.2-201ENST00000561492 181 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 MIR3942-201ENST00000585264 109 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 AC040896.1-201ENST00000613819 479 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 AC090517.2-201ENST00000614966 680 ntBASIC1.18□□□□□ -2.22
RNF139Q8WU17 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.18□□□□□ -2.22
RNF139Q8WU17 BX322639.1-202ENST00000423987 2213 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 RNU6-1123P-201ENST00000362347 106 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 RNU1-22P-201ENST00000363334 158 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 RNU4-12P-201ENST00000365233 139 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 MIR513A1-201ENST00000385138 129 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 MIR1283-1-201ENST00000408494 87 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 RNU6-373P-201ENST00000411247 98 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.17□□□□□ -2.22
RNF139Q8WU17 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.17□□□□□ -2.22
RNF139Q8WU17 MTCO3P8-201ENST00000453691 755 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 MTCO2P30-201ENST00000503662 364 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 Y_RNA.655-201ENST00000515919 96 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 RNU6-948P-201ENST00000516374 107 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 RNA5SP384-201ENST00000516615 116 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 SNORA59B-202ENST00000578183 701 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 AP000907.4-201ENST00000604143 237 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.17□□□□□ -2.22
RNF139Q8WU17 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.17□□□□□ -2.22
RNF139Q8WU17 TCL6_2.1-201ENST00000615162 119 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 U4.5-201ENST00000617137 123 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 AC012676.2-201ENST00000619258 186 ntBASIC1.17□□□□□ -2.22
RNF139Q8WU17 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RNF139Q8WU17 SNORD116-11-201ENST00000383882 92 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 RNU6-418P-201ENST00000384035 107 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 RNU6-1215P-201ENST00000384441 102 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 RNU6-790P-201ENST00000384479 105 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 RNU6-831P-201ENST00000384548 107 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
RNF139Q8WU17 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.16□□□□□ -2.22
RNF139Q8WU17 AC060773.1-201ENST00000421698 310 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 Z82188.1-201ENST00000436709 154 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.16□□□□□ -2.22
RNF139Q8WU17 AC074290.1-201ENST00000448883 135 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 PCMTD1P1-201ENST00000455560 355 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 RN7SKP88-201ENST00000516847 250 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 RNU6-1314P-201ENST00000517139 104 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.16□□□□□ -2.22
RNF139Q8WU17 MIR5006-201ENST00000583027 110 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 AC080078.3-201ENST00000605407 463 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 AL050343.2-201ENST00000607338 280 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 7SK.8-201ENST00000612110 250 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 7SK.11-201ENST00000615477 250 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 AC126177.8-201ENST00000618339 1015 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 7SK.13-201ENST00000622040 250 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 AC009033.1-201ENST00000624279 431 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 SCARNA4-201ENST00000629045 128 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 MIR3688-2-201ENST00000636963 87 ntBASIC1.16□□□□□ -2.22
RNF139Q8WU17 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RNF139Q8WU17 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.16□□□□□ -2.22
RNF139Q8WU17 Y_RNA.295-201ENST00000364918 102 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 RNU6-1235P-201ENST00000384559 107 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 MIR517A-201ENST00000385001 87 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
RNF139Q8WU17 SNORD115-47-201ENST00000391226 86 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 MIR548F1-201ENST00000408667 84 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 DAP3P1-201ENST00000441522 278 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 AL353572.1-201ENST00000442490 417 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 AC073910.1-201ENST00000445047 438 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 AC009237.7-201ENST00000447357 229 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.15□□□□□ -2.23
RNF139Q8WU17 RNU6-498P-201ENST00000459468 107 ntBASIC1.15□□□□□ -2.23
RNF139Q8WU17 COX6CP14-201ENST00000469580 174 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms