Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.53□□□□□ -1.84
SHKBP1Q8TBC3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.85
SHKBP1Q8TBC3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-508P-201ENST00000363231 103 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 Y_RNA.346-201ENST00000365385 112 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-1323P-201ENST00000384025 107 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 SNORD116-13-201ENST00000384408 92 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-136P-201ENST00000384663 107 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 SNORA12.1-201ENST00000390873 148 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 RNA5SP496-201ENST00000391240 109 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 RNU2-55P-201ENST00000411146 174 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 RPL23AP82-202ENST00000427528 469 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 AL161651.1-201ENST00000440882 223 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 RPL39P40-201ENST00000445481 146 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 RPL23AP7-203ENST00000449021 469 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 snoU13.14-201ENST00000459372 104 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 AC010401.1-201ENST00000463867 348 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-928P-201ENST00000516876 104 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 MIR3186-201ENST00000577404 85 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 MIR5004-201ENST00000579078 107 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 AL021707.8-201ENST00000609428 183 ntBASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHKBP1Q8TBC3 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 AC068647.1-201ENST00000489539 2265 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 SNORD114-19-201ENST00000363072 75 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-309P-201ENST00000364573 106 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 Y_RNA.432-201ENST00000384087 111 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 SNORA1.3-201ENST00000384676 136 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 AC090515.1-201ENST00000465295 476 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 AC023141.12-201ENST00000512399 199 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-1337P-201ENST00000516525 95 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 POLR3GP1-201ENST00000594073 261 ntBASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SHKBP1Q8TBC3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 FAM35BP-202ENST00000497389 3337 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-640P-201ENST00000363693 105 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 U3.15-201ENST00000365398 212 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 Y_RNA.348-201ENST00000365403 103 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 SNORD18B-201ENST00000365659 72 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 MIR634-201ENST00000385208 97 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 MIR873-201ENST00000401120 77 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 AL133475.1-201ENST00000404414 305 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-554P-201ENST00000410466 106 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 RNY4P29-201ENST00000410801 97 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 AL645939.1-201ENST00000453429 797 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-437P-201ENST00000459408 95 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 AC145146.1-201ENST00000496370 254 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 MIR4325-201ENST00000583049 90 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 AL137843.1-201ENST00000605078 385 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 AC025166.1-201ENST00000612411 163 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 AL138880.2-201ENST00000616214 239 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 MIR3199-2-201ENST00000636243 86 ntBASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHKBP1Q8TBC3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 AC004944.1-201ENST00000517807 3059 ntBASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 Y_RNA.388-201ENST00000383919 113 ntBASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 AC126124.2-201ENST00000413542 321 ntBASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 RN7SL442P-201ENST00000473804 320 ntBASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 RPS15AP11-201ENST00000594193 385 ntBASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 AC093732.2-201ENST00000607950 274 ntBASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 AC022149.2-201ENST00000621061 203 ntBASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 CEP170P1-201ENST00000502249 4587 ntBASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.49□□□□□ -1.85
SHKBP1Q8TBC3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 AL159152.1-201ENST00000635019 2587 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-674P-201ENST00000363831 107 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-294P-201ENST00000364999 102 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-1080P-201ENST00000383982 107 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 AL355796.1-201ENST00000406706 323 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 AL121890.1-201ENST00000435457 205 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 AL357552.1-201ENST00000445254 415 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms