Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 HMGB1P22-201ENST00000505315 124 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 RNU6-1299P-201ENST00000516316 100 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 SNORA70.19-201ENST00000516717 90 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 RNU6-158P-201ENST00000517104 100 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 AC009163.5-201ENST00000575421 637 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 AL049861.1-201ENST00000603130 150 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 AC097639.2-201ENST00000603159 172 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 AL162713.1-201ENST00000604480 262 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 MIR8058-201ENST00000615737 89 ntBASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEDD1Q8NHV4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 Y_RNA.244-201ENST00000364484 109 ntBASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 Y_RNA.634-201ENST00000364811 113 ntBASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 TOMM22P1-201ENST00000418578 312 ntBASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 FAM71BP1-201ENST00000604431 523 ntBASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 AC093732.2-201ENST00000607950 274 ntBASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 AL590808.1-201ENST00000618696 141 ntBASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 Z83843.1-201ENST00000604070 3685 ntBASIC3.97□□□□□ -1.77
NEDD1Q8NHV4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NEDD1Q8NHV4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NEDD1Q8NHV4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NEDD1Q8NHV4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 RNU6-600P-201ENST00000362524 99 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 SNORA7.2-201ENST00000364446 145 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 Y_RNA.342-201ENST00000365352 113 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 RNU6-1080P-201ENST00000383982 107 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 RNU6-1323P-201ENST00000384025 107 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 SNORA9-201ENST00000384215 133 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 MIR518C-201ENST00000384822 101 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 MIR548B-201ENST00000385247 97 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 SNORA11.1-201ENST00000408133 129 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 MIR1290-201ENST00000408735 78 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 RNA5SP390-201ENST00000410191 113 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 RNU6-437P-201ENST00000459408 95 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 SNORA70.12-201ENST00000516084 153 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 RNA5SP236-201ENST00000516169 116 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 RNU6-1337P-201ENST00000516525 95 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 MIR4276-201ENST00000584832 70 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 POLR3GP1-201ENST00000594073 261 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 AL161756.2-201ENST00000604597 246 ntBASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD1Q8NHV4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 RNU6-674P-201ENST00000363831 107 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 RNU6-217P-201ENST00000384164 104 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 MIR607-201ENST00000385241 96 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 Z98941.1-201ENST00000407764 100 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 RNA5SP201-201ENST00000410316 124 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 AC027124.2-201ENST00000428249 105 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 BX510359.1-201ENST00000456973 237 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 RN7SL807P-201ENST00000470923 297 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 RNU6-581P-201ENST00000516214 105 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 RNA5SP153-201ENST00000516498 76 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 TCL6_2.1-201ENST00000615162 119 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 AC080128.1-201ENST00000474389 1917 ntBASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD1Q8NHV4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 Y_RNA.49-201ENST00000362714 112 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 Y_RNA.107-201ENST00000363190 121 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 RNU4-41P-201ENST00000364426 143 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 HSPE1P26-201ENST00000405341 275 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 HMGN2P20-201ENST00000437531 273 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 PGBD4P5-201ENST00000445958 426 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 RPL23AP62-201ENST00000463396 453 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 AIG1P1-201ENST00000503376 148 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 SNORA70.14-201ENST00000516205 110 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 AC025281.1-201ENST00000567026 265 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 MIR3923-201ENST00000579521 83 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 MIR5195-201ENST00000583555 115 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 AL451007.1-201ENST00000595491 289 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 YPEL5P2-201ENST00000605553 359 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 MIR7112-201ENST00000616126 65 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 AC005562.2-201ENST00000618264 111 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 Y_RNA.818-201ENST00000618813 71 ntBASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.94□□□□□ -1.78
NEDD1Q8NHV4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 AC004925.1-201ENST00000624256 2706 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 RNU6-1134P-201ENST00000365156 101 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 MIR624-201ENST00000385217 97 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 EI24P2-201ENST00000397776 1076 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 RNA5SP136-201ENST00000410906 107 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 AC099548.1-201ENST00000421443 426 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 RPL23AP82-202ENST00000427528 469 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms