Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 DEFB131C-201ENST00000528817 165 ntBASIC3.1□□□□□ -1.91
SMC1BQ8NDV3 RRN3P3-201ENST00000549207 578 ntBASIC3.1□□□□□ -1.91
SMC1BQ8NDV3 AC136932.1-201ENST00000574771 208 ntBASIC3.1□□□□□ -1.91
SMC1BQ8NDV3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.1□□□□□ -1.91
SMC1BQ8NDV3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SMC1BQ8NDV3 Z82209.1-201ENST00000422141 2135 ntBASIC3.1□□□□□ -1.91
SMC1BQ8NDV3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 MIR26A1-201ENST00000362205 77 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 RNU6-937P-201ENST00000384325 106 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 AL390729.2-201ENST00000416137 156 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 AC005002.2-201ENST00000438228 269 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 AL161788.1-201ENST00000441805 169 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 SRIP1-201ENST00000489235 288 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 AC018448.1-201ENST00000552843 316 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 AC006006.1-201ENST00000603082 144 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 AL357075.2-201ENST00000614906 189 ntBASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMC1BQ8NDV3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SMC1BQ8NDV3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 RNU6-626P-201ENST00000363354 107 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 RNU6-461P-201ENST00000364195 107 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.230-201ENST00000364348 109 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.396-201ENST00000383949 103 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 RNU6-121P-201ENST00000410525 99 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 RNU1-117P-201ENST00000517041 158 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 RNU6-570P-201ENST00000517051 105 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 AC018630.3-201ENST00000542637 96 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 AC023043.3-201ENST00000593113 385 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 AC011373.1-201ENST00000607270 237 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 AC068205.3-201ENST00000636385 468 ntBASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMC1BQ8NDV3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 RNU6-944P-201ENST00000364023 107 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 SNORA72.2-201ENST00000365028 127 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 RNU6-20P-201ENST00000384106 107 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 RNU6-505P-201ENST00000384427 107 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 RNU2-20P-201ENST00000410425 191 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 AC004866.1-201ENST00000411748 78 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 RPL21P38-201ENST00000418090 167 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 TRBVB-201ENST00000477100 408 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.668-201ENST00000516233 93 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 AK6P2-201ENST00000549020 471 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 MIR3117-201ENST00000584034 78 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 AC005176.2-201ENST00000596933 147 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 AL356280.1-201ENST00000603614 379 ntBASIC3.07□□□□□ -1.92
SMC1BQ8NDV3 SNORD113-8-201ENST00000363497 74 ntBASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 RNU6-961P-201ENST00000363893 105 ntBASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 RNU6-1310P-201ENST00000384153 107 ntBASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 RNU6-107P-201ENST00000516643 102 ntBASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 AC062037.2-201ENST00000610137 73 ntBASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.06□□□□□ -1.92
SMC1BQ8NDV3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RNU1-35P-201ENST00000362782 153 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RNU1-91P-201ENST00000364746 163 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RNU6-234P-201ENST00000365229 104 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RNU6-21P-201ENST00000384710 107 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 MIR627-201ENST00000384979 97 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RNU6-220P-201ENST00000390919 107 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 Y_RNA.602-201ENST00000410535 92 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RNA5SP492-201ENST00000411330 114 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RPL19P1-201ENST00000411635 428 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 AC098869.1-201ENST00000481627 292 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 SEPT14P8-201ENST00000508026 178 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 AC234781.5-201ENST00000508429 271 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 MIR449C-201ENST00000516047 92 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RNU6-1098P-201ENST00000516772 96 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 RNU7-110P-201ENST00000516891 62 ntBASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SMC1BQ8NDV3 SNORD113-5-201ENST00000607261 78 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms