Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 RNU6-1213P-201ENST00000517075 94 ntBASIC1.55□□□□□ -2.16
CCDC197Q8NCU1 RNA5SP437-201ENST00000517249 129 ntBASIC1.55□□□□□ -2.16
CCDC197Q8NCU1 AC084364.2-201ENST00000546924 395 ntBASIC1.55□□□□□ -2.16
CCDC197Q8NCU1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.55□□□□□ -2.16
CCDC197Q8NCU1 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
CCDC197Q8NCU1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC197Q8NCU1 AL669831.3-213ENST00000636676 183 ntBASIC1.55□□□□□ -2.16
CCDC197Q8NCU1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 MIR934-201ENST00000401241 83 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 MIR1185-2-201ENST00000408687 86 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 AC010095.1-201ENST00000443543 144 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 AC027575.1-201ENST00000481064 460 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 RNU6-307P-201ENST00000516743 106 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 AC093023.1-201ENST00000547375 507 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 AC090617.3-201ENST00000573670 475 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 AL355073.2-201ENST00000612106 557 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 AC092794.2-201ENST00000620933 563 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 SCARNA15.3-201ENST00000626315 122 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 SCARNA4.1-201ENST00000628597 123 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 MTND5P35-201ENST00000557537 1720 ntBASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC197Q8NCU1 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 RNU6-1188P-201ENST00000363795 107 ntBASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 RNU6-417P-201ENST00000384712 107 ntBASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 RNU6-370P-201ENST00000411008 104 ntBASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 AC004584.2-201ENST00000570407 410 ntBASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CCDC197Q8NCU1 SNORA72.2-201ENST00000365028 127 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 MIR515-2-201ENST00000384883 83 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 MIR515-1-201ENST00000384884 83 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 MIR329-1-201ENST00000385028 80 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 MIR30A-201ENST00000385092 71 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 HSPE1P9-201ENST00000440046 311 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 AC112492.4-201ENST00000456549 352 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 RPL17P19-201ENST00000489069 552 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 AC091144.1-201ENST00000519573 138 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 AC110588.1-201ENST00000559699 137 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 MIR3198-2-201ENST00000577868 80 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 MIR4435-1-201ENST00000582552 80 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.52□□□□□ -2.17
CCDC197Q8NCU1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 RNA5SP467-201ENST00000391274 118 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 MIR1253-201ENST00000408273 105 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 Y_RNA.646-201ENST00000410980 101 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 AC069257.2-201ENST00000441819 155 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 MTND4P18-201ENST00000447010 465 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 U8.22-201ENST00000459141 133 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 RNU7-87P-201ENST00000459343 62 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 AC025465.3-201ENST00000510570 311 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 APOOP3-201ENST00000536787 586 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 MIR3162-201ENST00000581818 82 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 AC092881.1-201ENST00000638218 2733 ntBASIC1.51□□□□□ -2.17
CCDC197Q8NCU1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 MIR424-201ENST00000362227 98 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 RNA5SP361-201ENST00000362686 118 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 RNU6-310P-201ENST00000384655 107 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 SNORA75.6-201ENST00000391318 127 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 RNA5SP508-201ENST00000411327 119 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 AC092423.1-201ENST00000430165 186 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 SNORA44.1-201ENST00000517031 108 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 AC024995.1-201ENST00000523014 93 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 FRG2DP-202ENST00000566967 323 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 AC113139.1-201ENST00000605049 239 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 AL357075.2-201ENST00000614906 189 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 MIR8074-201ENST00000615081 81 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 IGHVIII-44-202ENST00000636235 289 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 U6.108-201ENST00000637764 58 ntBASIC1.5□□□□□ -2.17
CCDC197Q8NCU1 Y_RNA.303-201ENST00000364998 94 ntBASIC1.49□□□□□ -2.17
CCDC197Q8NCU1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms