Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.398-201ENST00000383952 99 ntBASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 RNU6-394P-201ENST00000410735 107 ntBASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 RNU7-57P-201ENST00000459540 60 ntBASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 AC008885.1-201ENST00000514930 301 ntBASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 RNA5SP217-201ENST00000515959 91 ntBASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 RNU6-965P-201ENST00000516721 96 ntBASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 AC073476.4-201ENST00000628409 72 ntBASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 AC091152.2-201ENST00000591628 2569 ntBASIC3.02□□□□□ -1.93
TRIM48Q8IWZ4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.7-201ENST00000362352 102 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.124-201ENST00000363339 93 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.172-201ENST00000363765 102 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.287-201ENST00000364853 94 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.293-201ENST00000364908 93 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.341-201ENST00000365341 102 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 SNORD67-201ENST00000390833 111 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 RPL21P3-201ENST00000395517 478 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 MIR1283-1-201ENST00000408494 87 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 RNU5E-9P-201ENST00000411164 104 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 AL139281.1-201ENST00000422120 335 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 RPS12P18-201ENST00000442381 270 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 AC016717.1-201ENST00000448918 286 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 RNU6-586P-201ENST00000517265 104 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 MIR3199-1-201ENST00000582434 88 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 AC013791.1-201ENST00000616619 62 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 SNORA50A-202ENST00000629536 136 ntBASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM48Q8IWZ4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM48Q8IWZ4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3□□□□□ -1.93
TRIM48Q8IWZ4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM48Q8IWZ4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM48Q8IWZ4 MIR22-201ENST00000362190 85 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.238-201ENST00000364441 102 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 RNU4-17P-201ENST00000365598 141 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 SNORA72.4-201ENST00000384174 132 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.572-201ENST00000384757 98 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 SNORA40.19-201ENST00000390846 128 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 RNU6-710P-201ENST00000410424 105 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 AC083906.5-201ENST00000503722 328 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 RNU7-200P-201ENST00000516105 62 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 AC100767.1-201ENST00000528178 123 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 MIR4753-201ENST00000585119 83 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 AL133393.1-201ENST00000603277 287 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3□□□□□ -1.93
TRIM48Q8IWZ4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3□□□□□ -1.93
TRIM48Q8IWZ4 AC008264.2-201ENST00000610193 3731 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.182-201ENST00000363880 111 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 RNA5SP139-201ENST00000364340 117 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 RNU6-234P-201ENST00000365229 104 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 AL355796.1-201ENST00000406706 323 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 RPS20P10-201ENST00000451209 253 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 AC109329.2-201ENST00000519658 482 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 AC027419.1-201ENST00000522976 328 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 AC021269.2-201ENST00000532318 330 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 AL078604.3-201ENST00000615580 211 ntBASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM48Q8IWZ4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.310-201ENST00000365063 113 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 RNU6-1130P-201ENST00000365434 107 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.368-201ENST00000365547 113 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.412-201ENST00000384001 104 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 RNU7-141P-201ENST00000459304 62 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 RNU1-143P-201ENST00000516296 146 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 AC025754.2-201ENST00000606491 432 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 AC004832.4-201ENST00000608952 331 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 U1.23-201ENST00000610293 146 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 RNU1-68P-201ENST00000615382 146 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms