Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC093331.1-201ENST00000521474 169 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
RNF135Q8IUD6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF135Q8IUD6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF135Q8IUD6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF135Q8IUD6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF135Q8IUD6 RNU6-486P-201ENST00000363116 107 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 RNU6-1274P-201ENST00000384557 107 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 MIR490-201ENST00000384865 128 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 SNORA79-201ENST00000408376 140 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 AL135786.1-201ENST00000415892 214 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF135Q8IUD6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF135Q8IUD6 AC006028.1-201ENST00000438379 402 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 UBE2DNL-203ENST00000474922 222 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF135Q8IUD6 AC109329.2-201ENST00000519658 482 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF135Q8IUD6 MIR5187-201ENST00000583479 76 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 AC106754.2-201ENST00000623006 233 ntBASIC4.04□□□□□ -1.76
RNF135Q8IUD6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF135Q8IUD6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF135Q8IUD6 AC018555.1-201ENST00000567548 1980 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RNF135Q8IUD6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF135Q8IUD6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF135Q8IUD6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF135Q8IUD6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RNF135Q8IUD6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF135Q8IUD6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.03□□□□□ -1.76
RNF135Q8IUD6 RNU6-944P-201ENST00000364023 107 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 RNA5SP51-201ENST00000364750 119 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 U8.6-201ENST00000364939 135 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 MIR548A1-201ENST00000385041 97 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 RNA5SP496-201ENST00000391240 109 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 Y_RNA.617-201ENST00000410920 90 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 AL159169.1-201ENST00000421119 127 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 SNRPGP8-201ENST00000454064 226 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 ATP5EP1-201ENST00000510257 156 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 RNA5SP20-201ENST00000515976 84 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 AC027419.1-201ENST00000522976 328 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 MIR8058-201ENST00000615737 89 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 AC110079.1-202ENST00000635213 138 ntBASIC4.03□□□□□ -1.76
RNF135Q8IUD6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.03□□□□□ -1.76
RNF135Q8IUD6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
RNF135Q8IUD6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
RNF135Q8IUD6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF135Q8IUD6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF135Q8IUD6 RNA5SP50-201ENST00000363731 107 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 SNORD31B-201ENST00000364977 69 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RNF135Q8IUD6 SNORA12.1-201ENST00000390873 148 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 RNY4P29-201ENST00000410801 97 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 RN7SKP101-201ENST00000411376 320 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF135Q8IUD6 AC016717.1-201ENST00000448918 286 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF135Q8IUD6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF135Q8IUD6 AC008155.2-201ENST00000464337 397 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 RNU6-781P-201ENST00000516377 101 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 RN7SKP83-201ENST00000516512 178 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 SNORD59.2-201ENST00000516873 68 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 AC093732.2-201ENST00000607950 274 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 AL591424.2-201ENST00000617023 128 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF135Q8IUD6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF135Q8IUD6 MAPK10-253ENST00000641010 4072 ntBASIC4.02□□□□□ -1.77
RNF135Q8IUD6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF135Q8IUD6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF135Q8IUD6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF135Q8IUD6 RNU6-674P-201ENST00000363831 107 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 SNORD6-201ENST00000365444 73 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 Y_RNA.388-201ENST00000383919 113 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 SNORA26.2-201ENST00000390922 122 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF135Q8IUD6 AC017083.1-201ENST00000428093 483 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 Y_RNA.649-201ENST00000459077 103 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 RPS26P45-201ENST00000471748 340 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 SCARNA17.1-201ENST00000516211 143 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 SCARNA17.2-201ENST00000516334 143 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF135Q8IUD6 AC091178.2-201ENST00000584401 117 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 SCARNA17.4-201ENST00000614296 143 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.01□□□□□ -1.77
RNF135Q8IUD6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF135Q8IUD6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF135Q8IUD6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF135Q8IUD6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF135Q8IUD6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF135Q8IUD6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RNF135Q8IUD6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF135Q8IUD6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4□□□□□ -1.77
RNF135Q8IUD6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF135Q8IUD6 RNU6-647P-201ENST00000364243 107 ntBASIC4□□□□□ -1.77
RNF135Q8IUD6 RNU6-978P-201ENST00000364371 103 ntBASIC4□□□□□ -1.77
RNF135Q8IUD6 RNU4-41P-201ENST00000364426 143 ntBASIC4□□□□□ -1.77
RNF135Q8IUD6 RNU6-294P-201ENST00000364999 102 ntBASIC4□□□□□ -1.77
RNF135Q8IUD6 RNU6-905P-201ENST00000384434 107 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms