Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL356379.1-201ENST00000414105 126 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.91□□□□□ -2.1
LDB1Q86U70 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 AC010095.1-201ENST00000443543 144 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 SNORD19B-201ENST00000459623 84 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 CYCSP23-201ENST00000519781 313 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
LDB1Q86U70 AC093027.1-201ENST00000546698 429 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.91□□□□□ -2.1
LDB1Q86U70 AC125232.2-201ENST00000592457 143 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 AC005034.5-201ENST00000604219 466 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 AC080078.3-201ENST00000605407 463 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 snoZ196.1-201ENST00000625269 89 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
LDB1Q86U70 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.1
LDB1Q86U70 MTND5P10-201ENST00000603719 1809 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 RNU4-73P-201ENST00000363164 141 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 Y_RNA.187-201ENST00000363918 113 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 MIR548B-201ENST00000385247 97 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 Y_RNA.595-201ENST00000410403 105 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 RNU6-57P-201ENST00000411348 103 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 AC114482.1-201ENST00000418010 247 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 AC060773.1-201ENST00000421698 310 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 RNU7-152P-201ENST00000458982 64 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.9□□□□□ -2.11
LDB1Q86U70 MIR2355-201ENST00000517199 87 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
LDB1Q86U70 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
LDB1Q86U70 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.9□□□□□ -2.11
LDB1Q86U70 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 RNU6-879P-201ENST00000364328 108 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 RNU6-1040P-201ENST00000383974 107 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 MIR329-1-201ENST00000385028 80 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LDB1Q86U70 SNORA69.1-201ENST00000390904 137 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 RNU6-1001P-201ENST00000411265 100 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 AL121890.1-201ENST00000435457 205 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.89□□□□□ -2.11
LDB1Q86U70 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 YWHAEP4-201ENST00000505390 198 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 AC011406.1-201ENST00000512440 370 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 RNVU1-2-201ENST00000516326 135 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 RNU7-4P-201ENST00000516961 62 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 AC022868.1-201ENST00000517767 391 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 AC091144.1-201ENST00000519573 138 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 AC144568.1-201ENST00000520139 137 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.89□□□□□ -2.11
LDB1Q86U70 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.89□□□□□ -2.11
LDB1Q86U70 AL109918.3-201ENST00000603072 338 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 AC087588.2-201ENST00000617667 426 ntBASIC1.89□□□□□ -2.11
LDB1Q86U70 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LDB1Q86U70 RNU6-1145P-201ENST00000384246 107 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 AC099799.1-201ENST00000439809 192 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 RPL23AP6-201ENST00000446637 472 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 U8.22-201ENST00000459141 133 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 RNU6-221P-201ENST00000459541 99 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 RNU6-1041P-201ENST00000516254 102 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 AK6P2-201ENST00000549020 471 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 MIR4795-201ENST00000584182 89 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
LDB1Q86U70 AL353149.1-201ENST00000610667 244 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.88□□□□□ -2.11
LDB1Q86U70 AC073544.1-201ENST00000600110 1595 ntBASIC1.88□□□□□ -2.11
LDB1Q86U70 AC092881.1-201ENST00000638218 2733 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
LDB1Q86U70 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LDB1Q86U70 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
LDB1Q86U70 Y_RNA.58-201ENST00000362807 102 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 Y_RNA.146-201ENST00000363549 102 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 Y_RNA.154-201ENST00000363624 102 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 RNU6-867P-201ENST00000364956 107 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 RNY3P1-201ENST00000365085 102 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 RNY3-201ENST00000365484 102 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 MIR559-201ENST00000385188 96 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 MIR1185-2-201ENST00000408687 86 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 AC008134.1-201ENST00000420943 193 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 snoU13.15-201ENST00000459407 104 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 AC105758.1-201ENST00000506038 399 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 RNU6-1146P-201ENST00000516282 102 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 Y_RNA.675-201ENST00000516389 149 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 RN7SKP49-201ENST00000516675 260 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.87□□□□□ -2.11
LDB1Q86U70 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.87□□□□□ -2.11
LDB1Q86U70 RAB11AP2-201ENST00000545905 639 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 MIR4448-201ENST00000584360 86 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 AC006001.4-201ENST00000622243 395 ntBASIC1.87□□□□□ -2.11
LDB1Q86U70 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms