Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 AC027419.1-201ENST00000522976 328 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 AC008739.2-201ENST00000597006 317 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 AC009831.4-201ENST00000620744 325 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 MIR6852-201ENST00000621699 66 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 AL049781.1-201ENST00000623195 3585 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 Y_RNA.85-201ENST00000363014 111 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 RNA5SP50-201ENST00000363731 107 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-283P-201ENST00000364788 107 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 DYNLT3P1-201ENST00000378574 347 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 SNORA51.10-201ENST00000384418 136 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 MIR29B2-201ENST00000385055 81 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-592P-201ENST00000411333 103 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 MTATP6P21-201ENST00000440681 189 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 AL442128.1-201ENST00000615151 90 ntBASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.19□□□□□ -1.74
SH3RF1Q7Z6J0 MAPK10-373ENST00000641983 6772 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-508P-201ENST00000363231 103 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 SNORA51.5-201ENST00000384126 131 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-820P-201ENST00000384273 107 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-1152P-201ENST00000384576 107 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNA5SP424-201ENST00000390988 115 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNA5SP120-201ENST00000410900 112 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNU7-14P-201ENST00000459331 62 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RPL21P10-201ENST00000463521 490 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-65P-201ENST00000516332 98 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNA5SP164-201ENST00000516533 110 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-126P-201ENST00000516685 103 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-63P-201ENST00000516690 95 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 RNU1-104P-201ENST00000517280 175 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 AC107934.2-201ENST00000518653 310 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 AP000867.2-201ENST00000532468 320 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 PRELID2P1-201ENST00000552837 301 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 AC105245.1-201ENST00000581934 244 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 MIR3124-201ENST00000582636 67 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 uc_338.14-201ENST00000613162 166 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SH3RF1Q7Z6J0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 AC058791.1-201ENST00000608412 3198 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 SNORD32B-201ENST00000364460 84 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 Y_RNA.634-201ENST00000364811 113 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 SNORD78.1-201ENST00000390866 65 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 RPL23AP48-201ENST00000406913 488 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 AC002075.2-201ENST00000425207 252 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-221P-201ENST00000459541 99 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 VWA8P1-201ENST00000510889 176 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 AC079598.5-201ENST00000547460 117 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 AC093732.2-201ENST00000607950 274 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 uc_338.4-201ENST00000616635 176 ntBASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH3RF1Q7Z6J0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 SNORA72-201ENST00000384339 132 ntBASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 MIR1302-5-201ENST00000408164 150 ntBASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-57P-201ENST00000411348 103 ntBASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 AC010099.1-201ENST00000455434 375 ntBASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 SNORD77.4-201ENST00000516158 81 ntBASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 RN7SKP43-201ENST00000516173 320 ntBASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.16□□□□□ -1.74
SH3RF1Q7Z6J0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SH3RF1Q7Z6J0 AC027290.2-201ENST00000623210 18662 ntBASIC4.15□□□□□ -1.74
SH3RF1Q7Z6J0 AC010733.2-201ENST00000589496 5702 ntBASIC4.15□□□□□ -1.74
SH3RF1Q7Z6J0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms