Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
SHFQ7M4L6 AC016717.2-201ENST00000609089 5141 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 MIR410-201ENST00000362222 80 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 RNU6-770P-201ENST00000363929 105 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 SNORA38-201ENST00000363946 132 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 RNU6-1264P-201ENST00000383891 107 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 RNU6-975P-201ENST00000384296 105 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 RNU6-937P-201ENST00000384325 106 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 Y_RNA.512-201ENST00000384518 102 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 MIR196B-201ENST00000384852 84 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 SRIP3-201ENST00000413200 219 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SHFQ7M4L6 AC123900.1-201ENST00000420390 96 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 COTL1P1-201ENST00000422309 375 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 AC016717.1-201ENST00000448918 286 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.12□□□□□ -2.07
SHFQ7M4L6 AC010531.2-201ENST00000465012 153 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 RNY3P15-201ENST00000516297 97 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 SNORA40.15-201ENST00000516884 107 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.12□□□□□ -2.07
SHFQ7M4L6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.12□□□□□ -2.07
SHFQ7M4L6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.12□□□□□ -2.07
SHFQ7M4L6 MIR4423-201ENST00000580922 80 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 PRR13P7-201ENST00000605538 430 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 AC130454.1-201ENST00000622948 401 ntBASIC2.12□□□□□ -2.07
SHFQ7M4L6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
SHFQ7M4L6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHFQ7M4L6 Y_RNA.64-201ENST00000362845 102 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 RNA5SP387-201ENST00000364226 106 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 RNU6-418P-201ENST00000384035 107 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 MIR518C-201ENST00000384822 101 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 RNA5SP184-201ENST00000411071 108 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 MTND3P2-201ENST00000438452 342 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 MTCO1P44-201ENST00000441935 243 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.11□□□□□ -2.07
SHFQ7M4L6 LINC01399-202ENST00000458450 244 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 RNU7-57P-201ENST00000459540 60 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.11□□□□□ -2.07
SHFQ7M4L6 AC025465.3-201ENST00000510570 311 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 RNA5SP24-201ENST00000516478 95 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 MIR4300-201ENST00000581016 96 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 MIR7106-201ENST00000612419 65 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 AC091932.3-201ENST00000624223 323 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 MIR1291-201ENST00000627649 87 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 MIR3674-201ENST00000636576 68 ntBASIC2.11□□□□□ -2.07
SHFQ7M4L6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHFQ7M4L6 LINC02555-201ENST00000563933 1951 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHFQ7M4L6 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 Y_RNA.19-201ENST00000362462 99 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 RNU6-238P-201ENST00000363313 106 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 Y_RNA.222-201ENST00000364264 102 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 RNU6-454P-201ENST00000364292 107 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 Y_RNA.462-201ENST00000384268 102 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 Y_RNA.570-201ENST00000384750 101 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 Y_RNA.574-201ENST00000384766 95 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 MIR568-201ENST00000385036 95 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 SNORD115-46-201ENST00000390982 71 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 MIR1185-2-201ENST00000408687 86 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 AC007064.1-201ENST00000412238 351 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.1□□□□□ -2.07
SHFQ7M4L6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.1□□□□□ -2.07
SHFQ7M4L6 TOMM22P2-201ENST00000430735 237 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 RPS15AP28-201ENST00000435088 386 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.1□□□□□ -2.07
SHFQ7M4L6 AL731563.1-201ENST00000442202 214 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 DYNLT3P2-201ENST00000442517 295 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.1□□□□□ -2.07
SHFQ7M4L6 AC114982.1-201ENST00000469402 321 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 HMGB3P3-201ENST00000510526 400 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 AC026436.1-201ENST00000510537 270 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.1□□□□□ -2.07
SHFQ7M4L6 MTCO2P24-201ENST00000515611 426 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.1□□□□□ -2.07
SHFQ7M4L6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.1□□□□□ -2.07
SHFQ7M4L6 AC005176.2-201ENST00000596933 147 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.1□□□□□ -2.07
SHFQ7M4L6 MIR6840-201ENST00000611937 71 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 MIR376A1-201ENST00000616574 68 ntBASIC2.1□□□□□ -2.07
SHFQ7M4L6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHFQ7M4L6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHFQ7M4L6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SHFQ7M4L6 Y_RNA.47-201ENST00000362697 108 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 Y_RNA.101-201ENST00000363154 102 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 Y_RNA.230-201ENST00000364348 109 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 SNORD63-201ENST00000384262 68 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 RNU6-301P-201ENST00000384277 107 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 SNORD14D-201ENST00000384390 87 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SHFQ7M4L6 RPL21P38-201ENST00000418090 167 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 AC139712.2-201ENST00000424302 339 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 MTCYBP9-201ENST00000431021 303 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.09□□□□□ -2.07
SHFQ7M4L6 AC098869.1-201ENST00000481627 292 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 RNU6-966P-201ENST00000516479 104 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 AC087441.2-201ENST00000529141 262 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 AC004467.1-201ENST00000615678 330 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms