Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU2-33P-201ENST00000410344 192 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.27□□□□□ -2.61
VPS13CQ709C8 FAM204CP-201ENST00000424489 642 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC116655.1-201ENST00000508324 901 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AC093519.1-201ENST00000566109 298 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 MIR4804-201ENST00000581683 73 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 AP001429.1-201ENST00000602568 530 ntBASIC-1.27□□□□□ -2.61
VPS13CQ709C8 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-1.27□□□□□ -2.61
VPS13CQ709C8 RNU6-862P-201ENST00000362804 105 ntBASIC-1.28□□□□□ -2.61
VPS13CQ709C8 RNU5E-8P-201ENST00000363502 116 ntBASIC-1.28□□□□□ -2.61
VPS13CQ709C8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-1.28□□□□□ -2.61
VPS13CQ709C8 AC099786.3-201ENST00000565735 1410 ntBASIC-1.28□□□□□ -2.61
VPS13CQ709C8 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.28□□□□□ -2.61
VPS13CQ709C8 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.28□□□□□ -2.61
VPS13CQ709C8 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.28□□□□□ -2.61
VPS13CQ709C8 MIR5706-201ENST00000579841 80 ntBASIC-1.28□□□□□ -2.61
VPS13CQ709C8 SEC63P2-201ENST00000503863 1939 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 AL139286.2-201ENST00000606838 396 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 RNU6-934P-201ENST00000365154 107 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 MT-TM-201ENST00000387377 68 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 snoU13.13-201ENST00000458842 104 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 RNU6-390P-201ENST00000516259 103 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 AC093012.1-202ENST00000549403 582 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.29□□□□□ -2.62
VPS13CQ709C8 RNU6-553P-201ENST00000364047 96 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 RNU6-187P-201ENST00000384139 106 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 AL158050.1-201ENST00000416077 457 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-1.29□□□□□ -2.62
VPS13CQ709C8 DEFB131E-201ENST00000532329 154 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 DEFB131E-202ENST00000602581 683 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 AL162376.1-201ENST00000624117 175 ntBASIC-1.29□□□□□ -2.62
VPS13CQ709C8 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.29□□□□□ -2.62
VPS13CQ709C8 BX322639.1-202ENST00000423987 2213 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 RNU6-490P-201ENST00000362985 107 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 RNU6-1226P-201ENST00000384317 107 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 RNA5SP467-201ENST00000391274 118 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 PCNPP5-201ENST00000452246 481 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-1.3□□□□□ -2.62
VPS13CQ709C8 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.3□□□□□ -2.62
VPS13CQ709C8 SNORD114-19-201ENST00000363072 75 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 Y_RNA.234-201ENST00000364409 97 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.3□□□□□ -2.62
VPS13CQ709C8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.3□□□□□ -2.62
VPS13CQ709C8 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.3□□□□□ -2.62
VPS13CQ709C8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.3□□□□□ -2.62
VPS13CQ709C8 AC016831.2-201ENST00000417179 352 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.31□□□□□ -2.62
VPS13CQ709C8 AC073910.1-201ENST00000445047 438 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.31□□□□□ -2.62
VPS13CQ709C8 XACT-201ENST00000468762 497 ntTSL 5 BASIC-1.31□□□□□ -2.62
VPS13CQ709C8 AC107401.1-201ENST00000503426 685 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 AC090897.1-201ENST00000580909 226 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 SNORD18.1-201ENST00000363807 70 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 AL050341.1-201ENST00000447743 313 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 AC093809.1-201ENST00000509155 340 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 MIR2115-201ENST00000516657 100 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 AL354950.2-201ENST00000617939 290 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.31□□□□□ -2.62
VPS13CQ709C8 MTND5P18-201ENST00000445624 1801 ntBASIC-1.31□□□□□ -2.62
VPS13CQ709C8 RNU6-778P-201ENST00000363269 103 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 MIR147A-201ENST00000385079 72 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 TAF13P2-201ENST00000416876 286 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 RNU6-448P-201ENST00000517052 107 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 AC091304.10-201ENST00000641554 121 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 TPMTP2-201ENST00000414372 726 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.32□□□□□ -2.62
VPS13CQ709C8 AL512326.2-201ENST00000426359 151 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.32□□□□□ -2.62
VPS13CQ709C8 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-1.32□□□□□ -2.62
VPS13CQ709C8 SNORD115-28-201ENST00000363931 81 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 RNU6-431P-201ENST00000383874 107 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 SNORA67.2-201ENST00000384300 149 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 MED28P2-201ENST00000475771 317 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.32□□□□□ -2.62
VPS13CQ709C8 AL713998.2-201ENST00000604538 1198 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 MTND4P8-201ENST00000514997 1362 ntBASIC-1.32□□□□□ -2.62
VPS13CQ709C8 snoZ40.1-201ENST00000364540 72 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-1.33□□□□□ -2.62
VPS13CQ709C8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.33□□□□□ -2.62
VPS13CQ709C8 AL392103.1-201ENST00000447000 198 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 AC107075.1-201ENST00000613695 314 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 Y_RNA.332-201ENST00000365271 113 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 RNA5SP475-201ENST00000410568 110 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 MTCYBP42-201ENST00000444653 1130 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 AP003733.2-201ENST00000529409 171 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 AC008250.2-201ENST00000615261 205 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 SNORA2.2-201ENST00000365473 135 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 AP000870.1-201ENST00000472927 406 ntBASIC-1.33□□□□□ -2.62
VPS13CQ709C8 AC046134.1-201ENST00000514454 666 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms