Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 SNORD113-5-201ENST00000607261 78 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AC011373.1-201ENST00000607270 237 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AC127459.3-201ENST00000624328 466 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 MIR6733-201ENST00000635723 61 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 AC080128.1-201ENST00000474389 1917 ntBASIC2.13□□□□□ -2.07
C9orf139Q6ZV77 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.101-201ENST00000363154 102 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 RNU6-944P-201ENST00000364023 107 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.257-201ENST00000364596 102 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 SNORA20.1-201ENST00000364790 130 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 SNORD87-201ENST00000364849 89 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 SNORA67.2-201ENST00000384300 149 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.498-201ENST00000384460 102 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 RNU6-1274P-201ENST00000384557 107 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.539-201ENST00000384635 107 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 MIR592-201ENST00000384959 97 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 MIR29B2-201ENST00000385055 81 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 MIR181B1-201ENST00000385240 110 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AL603910.2-201ENST00000407268 136 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 RNU6-847P-201ENST00000411115 108 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 RNA5SP508-201ENST00000411327 119 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AC104389.3-201ENST00000445629 235 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AC009237.7-201ENST00000447357 229 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 HMGB3P17-201ENST00000504195 649 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AC023141.11-201ENST00000508864 202 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 SCARNA24.2-201ENST00000516968 130 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AC090616.3-201ENST00000582184 217 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 MIR3199-1-201ENST00000582434 88 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AL590808.1-201ENST00000618696 141 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.12□□□□□ -2.07
C9orf139Q6ZV77 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.20-201ENST00000362479 113 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.416-201ENST00000384014 113 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.446-201ENST00000384178 104 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 RNU6-21P-201ENST00000384710 107 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 MIR27B-201ENST00000385129 97 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 HMGN2P35-201ENST00000412164 270 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 AC090515.1-201ENST00000465295 476 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 MIR449C-201ENST00000516047 92 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 RNU1-117P-201ENST00000517041 158 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 RNU6-111P-201ENST00000517179 105 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 SNORD11B-201ENST00000607707 90 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 AC069294.1-201ENST00000608397 350 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 AC004467.1-201ENST00000615678 330 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 U4.3-201ENST00000621047 82 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 AC091932.3-201ENST00000624223 323 ntBASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
C9orf139Q6ZV77 SNORA38-201ENST00000363946 132 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 SNORD27-201ENST00000363981 72 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.331-201ENST00000365267 102 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 MIR548H3-201ENST00000408771 118 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 RNU6-1199P-201ENST00000411249 104 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 RN7SL297P-201ENST00000483161 293 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 SERF1AP1-201ENST00000514575 187 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 RNA5SP76-201ENST00000516277 87 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 RNU6-1098P-201ENST00000516772 96 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 AC091544.4-201ENST00000555268 342 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 AC105245.1-201ENST00000581934 244 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 MIR4635-201ENST00000583759 79 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 AC022441.3-201ENST00000605737 136 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 AC068205.3-201ENST00000636385 468 ntBASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
C9orf139Q6ZV77 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 MIR410-201ENST00000362222 80 ntBASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 VTRNA1-1-201ENST00000363120 99 ntBASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.352-201ENST00000365439 102 ntBASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 RNU6-338P-201ENST00000383888 105 ntBASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.478-201ENST00000384358 107 ntBASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.552-201ENST00000384665 112 ntBASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 Y_RNA.569-201ENST00000384749 103 ntBASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 MT-TR-201ENST00000387439 65 ntBASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 AL390729.2-201ENST00000416137 156 ntBASIC2.09□□□□□ -2.07
C9orf139Q6ZV77 OOSP1P1-201ENST00000423265 274 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms