Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RPS20P10-201ENST00000451209 253 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 RNA5SP217-201ENST00000515959 91 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 RN7SKP164-201ENST00000516138 266 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 AC103810.1-201ENST00000579873 453 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 MIR5688-201ENST00000580619 83 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 U6.115-201ENST00000636045 103 ntBASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.78□□□□□ -1.8
USPL1Q5W0Q7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 RNU6-899P-201ENST00000363947 107 ntBASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 Y_RNA.291-201ENST00000364886 113 ntBASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 Y_RNA.357-201ENST00000365487 109 ntBASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 SNORA72.4-201ENST00000384174 132 ntBASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 AC079600.2-201ENST00000550076 130 ntBASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 MIR548AI-201ENST00000579940 88 ntBASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 MIR4765-201ENST00000585007 77 ntBASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
USPL1Q5W0Q7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RNU6-486P-201ENST00000363116 107 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RNU6-81P-201ENST00000365608 104 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RNU6-449P-201ENST00000383914 107 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 MIR300-201ENST00000401138 83 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RNU2-2P-201ENST00000410396 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RNU5E-9P-201ENST00000411164 104 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 Z98742.2-201ENST00000431564 187 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 AC074290.1-201ENST00000448883 135 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RNU6-346P-201ENST00000516288 111 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 AC104984.5-201ENST00000586878 94 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RPL30P11-203ENST00000598995 310 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RNU2-4P-201ENST00000606190 192 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.15-201ENST00000611544 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.16-201ENST00000613119 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.12-201ENST00000613778 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.9-201ENST00000615427 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 MIR6715A-201ENST00000615929 79 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.11-201ENST00000616345 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.2-201ENST00000616535 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.3-201ENST00000617785 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.19-201ENST00000618602 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 RNU2-1-201ENST00000618664 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.6-201ENST00000619225 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.5-201ENST00000619465 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 U2.10-201ENST00000620268 191 ntBASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
USPL1Q5W0Q7 Y_RNA.182-201ENST00000363880 111 ntBASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 RNU6-275P-201ENST00000364910 107 ntBASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 RNU6-381P-201ENST00000391259 108 ntBASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 U8.19-201ENST00000459095 133 ntBASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 RPS27P26-201ENST00000494583 239 ntBASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 AC007318.2-201ENST00000620999 243 ntBASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 MIR7153-201ENST00000637758 57 ntBASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.75□□□□□ -1.81
USPL1Q5W0Q7 AL159152.1-201ENST00000635019 2587 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 RNU4-84P-201ENST00000364200 139 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 RNA5SP139-201ENST00000364340 117 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 RNU6-1305P-201ENST00000364353 104 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 Y_RNA.343-201ENST00000365354 112 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 Y_RNA.412-201ENST00000384001 104 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 SNORA8.3-201ENST00000384679 139 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 MIR548B-201ENST00000385247 97 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 SNORA12-201ENST00000391162 147 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 SNORA26.5-201ENST00000391215 123 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 EBAG9P1-201ENST00000418955 543 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 AC087499.2-201ENST00000432861 149 ntBASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.74□□□□□ -1.81
USPL1Q5W0Q7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 MAPK10-322ENST00000641485 4530 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 Y_RNA.341-201ENST00000365341 102 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 SNORD116-18-201ENST00000383961 92 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 RNU6-851P-201ENST00000384565 107 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 MIR1185-2-201ENST00000408687 86 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 RNU6-855P-201ENST00000410395 104 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 RNU2-52P-201ENST00000410680 190 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 AC063976.3-201ENST00000426849 329 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 AL135790.2-201ENST00000437701 267 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 AC114982.1-201ENST00000469402 321 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 RN7SL20P-201ENST00000488827 297 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms