Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR4276-201ENST00000584832 70 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 AC093732.2-201ENST00000607950 274 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RC3H1Q5TC82 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RC3H1Q5TC82 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.38□□□□□ -1.71
RC3H1Q5TC82 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RC3H1Q5TC82 Y_RNA.91-201ENST00000363042 107 ntBASIC4.38□□□□□ -1.71
RC3H1Q5TC82 RNU6-1014P-201ENST00000383940 103 ntBASIC4.38□□□□□ -1.71
RC3H1Q5TC82 Y_RNA.544-201ENST00000384650 113 ntBASIC4.38□□□□□ -1.71
RC3H1Q5TC82 AL355796.1-201ENST00000406706 323 ntBASIC4.38□□□□□ -1.71
RC3H1Q5TC82 MIR1185-2-201ENST00000408687 86 ntBASIC4.38□□□□□ -1.71
RC3H1Q5TC82 RNA5SP306-201ENST00000411087 107 ntBASIC4.38□□□□□ -1.71
RC3H1Q5TC82 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.38□□□□□ -1.71
RC3H1Q5TC82 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RC3H1Q5TC82 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.38□□□□□ -1.71
RC3H1Q5TC82 FAM35DP-201ENST00000323387 2712 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RC3H1Q5TC82 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
RC3H1Q5TC82 Y_RNA.40-201ENST00000362645 93 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 RNU6-820P-201ENST00000384273 107 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 MIR570-201ENST00000384917 97 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 MIR624-201ENST00000385217 97 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 MIR513A2-201ENST00000385249 127 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 RPS26P15-201ENST00000488067 348 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 AC145146.1-201ENST00000496370 254 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 AC025521.1-201ENST00000621624 286 ntBASIC4.37□□□□□ -1.71
RC3H1Q5TC82 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RC3H1Q5TC82 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RC3H1Q5TC82 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RC3H1Q5TC82 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.37□□□□□ -1.71
RC3H1Q5TC82 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.37□□□□□ -1.71
RC3H1Q5TC82 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RC3H1Q5TC82 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.36□□□□□ -1.71
RC3H1Q5TC82 RNA5SP42-201ENST00000364278 115 ntBASIC4.36□□□□□ -1.71
RC3H1Q5TC82 RNU6-1305P-201ENST00000364353 104 ntBASIC4.36□□□□□ -1.71
RC3H1Q5TC82 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RC3H1Q5TC82 HSPE1P26-201ENST00000405341 275 ntBASIC4.36□□□□□ -1.71
RC3H1Q5TC82 AC109327.2-201ENST00000448339 378 ntBASIC4.36□□□□□ -1.71
RC3H1Q5TC82 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.36□□□□□ -1.71
RC3H1Q5TC82 snoU13.14-201ENST00000459372 104 ntBASIC4.36□□□□□ -1.71
RC3H1Q5TC82 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.36□□□□□ -1.71
RC3H1Q5TC82 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.36□□□□□ -1.71
RC3H1Q5TC82 RNU6-94P-201ENST00000607728 107 ntBASIC4.36□□□□□ -1.71
RC3H1Q5TC82 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
RC3H1Q5TC82 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RC3H1Q5TC82 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.36□□□□□ -1.71
RC3H1Q5TC82 FAM35BP-202ENST00000497389 3337 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 SNORA80A-201ENST00000363922 136 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 RNA5SP136-201ENST00000410906 107 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 RNA5SP127-201ENST00000411051 133 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 RNU6-592P-201ENST00000411333 103 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 AF228730.3-201ENST00000436691 102 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 AL161651.1-201ENST00000440882 223 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 RPS29P31-201ENST00000446147 164 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 RPL39P34-201ENST00000477141 156 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 SNORD77.4-201ENST00000516158 81 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 RNA5SP341-201ENST00000516261 117 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 AC105245.1-201ENST00000581934 244 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 AL162274.2-201ENST00000614406 332 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 uc_338.4-201ENST00000616635 176 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 MIR3199-2-201ENST00000636243 86 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RC3H1Q5TC82 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.35□□□□□ -1.71
RC3H1Q5TC82 OTUD4P1-201ENST00000237841 3067 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 AC004944.1-201ENST00000517807 3059 ntBASIC4.35□□□□□ -1.71
RC3H1Q5TC82 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RC3H1Q5TC82 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RC3H1Q5TC82 SNORA27.1-201ENST00000362604 124 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 Y_RNA.220-201ENST00000364244 109 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 RNY1P7-201ENST00000384743 110 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 MIR450A2-201ENST00000385022 100 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 MIR586-201ENST00000385035 97 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 MIR29B2-201ENST00000385055 81 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RC3H1Q5TC82 AL138878.1-201ENST00000405131 347 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 CALM2P4-201ENST00000430810 426 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 RPS26P55-201ENST00000471178 356 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.34□□□□□ -1.71
RC3H1Q5TC82 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RC3H1Q5TC82 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
RC3H1Q5TC82 AL136360.1-201ENST00000503377 1900 ntBASIC4.34□□□□□ -1.71
RC3H1Q5TC82 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
RC3H1Q5TC82 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RC3H1Q5TC82 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RC3H1Q5TC82 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RC3H1Q5TC82 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RC3H1Q5TC82 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RC3H1Q5TC82 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RC3H1Q5TC82 Y_RNA.49-201ENST00000362714 112 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 RNU6-271P-201ENST00000363858 105 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 Y_RNA.323-201ENST00000365157 109 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 SNORA26-201ENST00000391286 122 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 AL133475.1-201ENST00000404414 305 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 COTL1P1-201ENST00000422309 375 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 RPL23AP62-201ENST00000463396 453 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 AC107626.1-201ENST00000471084 183 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 AL360157.1-201ENST00000565962 87 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 RPS15AP11-201ENST00000594193 385 ntBASIC4.33□□□□□ -1.72
RC3H1Q5TC82 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms