Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 AC008134.1-201ENST00000420943 193 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 TOMM22P2-201ENST00000430735 237 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 UQCRBP2-201ENST00000447827 297 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 RNU7-169P-201ENST00000459456 61 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 AP001486.1-201ENST00000463339 476 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 Y_RNA.661-201ENST00000516003 99 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 SUMO2P18-201ENST00000518873 252 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 AC092447.9-201ENST00000603395 144 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 AL353149.1-201ENST00000610667 244 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 AC013412.1-201ENST00000610687 192 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 MIR4272-201ENST00000635924 64 ntBASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LRIF1Q5T3J3 AC131280.1-202ENST00000624067 4211 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 MIR410-201ENST00000362222 80 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 RNU6-1264P-201ENST00000383891 107 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 MIR597-201ENST00000384968 97 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 SNORA48.1-201ENST00000390879 135 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 SNORD12B-201ENST00000410433 91 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 AL356379.1-201ENST00000414105 126 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 AL049873.1-201ENST00000480540 376 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 AP005660.1-201ENST00000522972 293 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 AC083806.3-201ENST00000614016 455 ntBASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LRIF1Q5T3J3 Y_RNA.27-201ENST00000362540 103 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 AL512604.1-201ENST00000404812 257 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 RNU6-57P-201ENST00000411348 103 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 ELOCP21-201ENST00000412558 336 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 AC060773.1-201ENST00000421698 310 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 SNORA40.9-201ENST00000515895 93 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 RNU6-475P-201ENST00000516073 104 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 SNORA40.14-201ENST00000516543 86 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 AC025647.1-201ENST00000517879 253 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 MIR3684-201ENST00000579779 74 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 AL606534.2-204ENST00000635008 178 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
LRIF1Q5T3J3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 MIR369-201ENST00000362155 70 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 Y_RNA.128-201ENST00000363391 112 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 RNY3P11-201ENST00000364153 102 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 Y_RNA.498-201ENST00000384460 102 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 AL158823.1-201ENST00000418441 478 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 AC096920.1-201ENST00000423991 241 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 FCF1P4-201ENST00000448326 183 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 AC011406.1-201ENST00000512440 370 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 RNU4-77P-201ENST00000516692 156 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 AC018448.1-201ENST00000552843 316 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 AC006600.1-201ENST00000572529 153 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 AC008749.1-201ENST00000597650 306 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.15-201ENST00000611544 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.16-201ENST00000613119 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.12-201ENST00000613778 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.20-201ENST00000613956 192 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 AL357075.2-201ENST00000614906 189 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.9-201ENST00000615427 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.11-201ENST00000616345 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.2-201ENST00000616535 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.3-201ENST00000617785 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.19-201ENST00000618602 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 RNU2-1-201ENST00000618664 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.6-201ENST00000619225 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.5-201ENST00000619465 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 U2.10-201ENST00000620268 191 ntBASIC1.95□□□□□ -2.1
LRIF1Q5T3J3 ZNF702P-202ENST00000434269 1966 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 Y_RNA.445-201ENST00000384168 102 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 RNY1P14-201ENST00000384426 108 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 Y_RNA.526-201ENST00000384572 110 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 SNORD78.2-201ENST00000391076 69 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 RNA5SP501-201ENST00000410990 112 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 CHEK2P4-201ENST00000450340 246 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 RPL23AP3-201ENST00000453844 468 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 RNU6-1012P-201ENST00000516606 109 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 RNU6-107P-201ENST00000516643 102 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 GNAI2P1-201ENST00000541815 315 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 AC022513.1-201ENST00000624512 117 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 AC134503.1-201ENST00000633048 54 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LRIF1Q5T3J3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms