Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.67□□□□□ -2.52
NUP188Q5SRE5 MIR4804-201ENST00000581683 73 ntBASIC-0.67□□□□□ -2.52
NUP188Q5SRE5 RNU6-650P-201ENST00000365658 111 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 RPS3AP3-201ENST00000411933 242 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 MTND3P17-201ENST00000416968 344 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 TIMM9P2-201ENST00000419324 266 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 AL590135.1-201ENST00000422215 156 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 AC019205.3-201ENST00000424573 156 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 AC010975.2-201ENST00000427781 588 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 MTND4LP7-201ENST00000431728 294 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 AC016700.2-201ENST00000446011 156 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 SNORD126-201ENST00000459475 77 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 AC015911.1-201ENST00000495111 156 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 AC138869.1-201ENST00000568623 124 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 AC090186.1-201ENST00000605991 572 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 AC009994.1-201ENST00000606889 253 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 AC007684.1-201ENST00000609671 477 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 U4.7-201ENST00000638126 106 ntBASIC-0.68□□□□□ -2.52
NUP188Q5SRE5 RNU6-369P-201ENST00000362515 102 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 RNU6-946P-201ENST00000383878 107 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 ZNF885P-201ENST00000420174 1098 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 MTCO2P23-201ENST00000425216 680 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 RPL23AP30-201ENST00000432419 501 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 RPL17P19-201ENST00000489069 552 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 AL512347.1-201ENST00000566420 503 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 AL450270.1-201ENST00000606160 391 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 AC104458.1-201ENST00000608243 463 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 RNA5SP300-201ENST00000391197 107 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 AC104072.1-201ENST00000568817 668 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 MIR548AO-201ENST00000579992 96 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 AL355297.3-201ENST00000604082 446 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 AC131159.1-201ENST00000621854 213 ntBASIC-0.69□□□□□ -2.52
NUP188Q5SRE5 U3.4-201ENST00000363352 213 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 RNU6-960P-201ENST00000364056 120 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 SNORD114-3-201ENST00000364969 75 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 SNORA12.1-201ENST00000390873 148 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 SNORD65.1-201ENST00000390889 71 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 MTCO1P17-201ENST00000411522 491 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 USP9YP28-201ENST00000435142 589 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 RNU7-57P-201ENST00000459540 60 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 RNU7-99P-201ENST00000516271 62 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 AC078795.3-201ENST00000602913 472 ntBASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
NUP188Q5SRE5 RNU1-76P-201ENST00000362903 159 ntBASIC-0.71□□□□□ -2.52
NUP188Q5SRE5 MIR549A-201ENST00000385268 96 ntBASIC-0.71□□□□□ -2.52
NUP188Q5SRE5 RNU2-62P-201ENST00000410868 191 ntBASIC-0.71□□□□□ -2.52
NUP188Q5SRE5 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.71□□□□□ -2.52
NUP188Q5SRE5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.71□□□□□ -2.52
NUP188Q5SRE5 RBM11P1-201ENST00000604951 799 ntBASIC-0.71□□□□□ -2.52
NUP188Q5SRE5 AL591926.4-201ENST00000616895 298 ntBASIC-0.71□□□□□ -2.52
NUP188Q5SRE5 AC090960.1-201ENST00000421072 306 ntBASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 MTCO3P42-201ENST00000509488 518 ntBASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 MTCO3P39-201ENST00000514812 518 ntBASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 RNU6-377P-201ENST00000515965 102 ntBASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 AC104383.1-201ENST00000530297 370 ntBASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 AL117336.2-201ENST00000602435 335 ntBASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 AL158042.1-201ENST00000605338 460 ntBASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.72□□□□□ -2.52
NUP188Q5SRE5 AP000568.1-201ENST00000282964 442 ntBASIC-0.72□□□□□ -2.53
NUP188Q5SRE5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.72□□□□□ -2.53
NUP188Q5SRE5 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.72□□□□□ -2.53
NUP188Q5SRE5 RPL17P35-201ENST00000432217 549 ntBASIC-0.72□□□□□ -2.53
NUP188Q5SRE5 AC005002.2-201ENST00000438228 269 ntBASIC-0.72□□□□□ -2.53
NUP188Q5SRE5 AP002453.2-201ENST00000533503 320 ntBASIC-0.72□□□□□ -2.53
NUP188Q5SRE5 Z99289.3-201ENST00000605586 594 ntBASIC-0.72□□□□□ -2.53
NUP188Q5SRE5 MIR3666-201ENST00000607845 111 ntBASIC-0.72□□□□□ -2.53
NUP188Q5SRE5 SNORA72.1-201ENST00000363485 129 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 RNU6-853P-201ENST00000364306 107 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 RNU6-692P-201ENST00000384496 107 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 PCNPP3-201ENST00000393579 471 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 SNORD100-201ENST00000408573 76 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 ELOCP21-201ENST00000412558 336 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 RNU7-28P-201ENST00000516759 62 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 MIR5692A1-201ENST00000580523 69 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 Z99497.2-201ENST00000603634 310 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 MTND4P4-201ENST00000439033 1366 ntBASIC-0.73□□□□□ -2.53
NUP188Q5SRE5 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.74□□□□□ -2.53
NUP188Q5SRE5 AC006366.1-201ENST00000422002 759 ntBASIC-0.74□□□□□ -2.53
NUP188Q5SRE5 MED13P1-201ENST00000428342 171 ntBASIC-0.74□□□□□ -2.53
NUP188Q5SRE5 MRPS10P2-201ENST00000431226 381 ntBASIC-0.74□□□□□ -2.53
NUP188Q5SRE5 AL133396.1-201ENST00000432048 687 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms