Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNU6-245P-201ENST00000384020 107 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 RNU6-713P-201ENST00000384761 107 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 AL079342.1-201ENST00000401460 267 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 RNA5SP181-201ENST00000410246 98 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 AC010095.1-201ENST00000443543 144 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 AC055731.1-201ENST00000474387 401 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.713-201ENST00000517013 96 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 RNU2-19P-201ENST00000517288 84 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 NDUFA5P6-201ENST00000542110 379 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.8□□□□□ -1.96
LONRF3Q496Y0 SNRPGP20-201ENST00000604477 205 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.772-201ENST00000606692 102 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 AC010999.1-201ENST00000611856 324 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 MIR6840-201ENST00000611937 71 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.8□□□□□ -1.96
LONRF3Q496Y0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.8□□□□□ -1.96
LONRF3Q496Y0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.8□□□□□ -1.96
LONRF3Q496Y0 AC245060.5-201ENST00000610778 3293 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 RNU5F-3P-201ENST00000363767 117 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 SNORA40.19-201ENST00000390846 128 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 MRPL35P1-201ENST00000404272 572 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 MIR320B2-201ENST00000408479 138 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 AC027124.2-201ENST00000428249 105 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.79□□□□□ -1.96
LONRF3Q496Y0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.79□□□□□ -1.96
LONRF3Q496Y0 LINC01399-202ENST00000458450 244 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.79□□□□□ -1.96
LONRF3Q496Y0 RNU6-1143P-201ENST00000516125 104 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 AC018630.3-201ENST00000542637 96 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 AC004817.2-201ENST00000561794 651 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 MIR3945-201ENST00000581853 98 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 AL137847.3-201ENST00000611521 109 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 MIR8062-201ENST00000621515 85 ntBASIC2.79□□□□□ -1.96
LONRF3Q496Y0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
LONRF3Q496Y0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LONRF3Q496Y0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LONRF3Q496Y0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LONRF3Q496Y0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
LONRF3Q496Y0 MIR21-201ENST00000362134 72 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.179-201ENST00000363844 90 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 RNU6-505P-201ENST00000384427 107 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 MIR27B-201ENST00000385129 97 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 RNU6-121P-201ENST00000410525 99 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 PRELID3BP1-201ENST00000457142 540 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 RNU6-991P-201ENST00000516168 107 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 DEFB131C-201ENST00000528817 165 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.78□□□□□ -1.96
LONRF3Q496Y0 AC026470.2-201ENST00000561492 181 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 AC233702.2-202ENST00000562547 291 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 MZT1P2-201ENST00000604387 248 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 AL357075.2-201ENST00000614906 189 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 AC005562.2-201ENST00000618264 111 ntBASIC2.78□□□□□ -1.96
LONRF3Q496Y0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LONRF3Q496Y0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LONRF3Q496Y0 MTND5P35-201ENST00000557537 1720 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 AL596028.1-201ENST00000326971 197 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.143-201ENST00000363520 106 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 RNU6-702P-201ENST00000364982 107 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 SNORA18.2-201ENST00000383865 132 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 RNU6-793P-201ENST00000384233 104 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.77□□□□□ -1.97
LONRF3Q496Y0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.77□□□□□ -1.97
LONRF3Q496Y0 AC245102.2-201ENST00000448956 180 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 AC091179.3-201ENST00000474761 144 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.683-201ENST00000516508 93 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.77□□□□□ -1.97
LONRF3Q496Y0 AC136932.1-201ENST00000574771 208 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 MIR1248-201ENST00000629190 106 ntBASIC2.77□□□□□ -1.97
LONRF3Q496Y0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.77□□□□□ -1.97
LONRF3Q496Y0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.77□□□□□ -1.97
LONRF3Q496Y0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
LONRF3Q496Y0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LONRF3Q496Y0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LONRF3Q496Y0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
LONRF3Q496Y0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.76□□□□□ -1.97
LONRF3Q496Y0 RNU1-62P-201ENST00000362599 164 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 SNORD32B-201ENST00000364460 84 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.396-201ENST00000383949 103 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 Y_RNA.556-201ENST00000384677 113 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 SNORA67.4-201ENST00000384688 142 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 MIR17-201ENST00000385012 84 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 HMGN2P39-201ENST00000398005 273 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 MIR1261-201ENST00000408659 82 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 RNU2-20P-201ENST00000410425 191 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 RN7SKP284-201ENST00000411002 343 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 AC004866.1-201ENST00000411748 78 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 AC004386.2-201ENST00000441858 148 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 PCNPP5-201ENST00000452246 481 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 RPL26P26-201ENST00000480251 434 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 AC025465.3-201ENST00000510570 311 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 SNORA40.9-201ENST00000515895 93 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.76□□□□□ -1.97
LONRF3Q496Y0 AP003733.2-201ENST00000529409 171 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 SNORD53-201ENST00000579969 78 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 AC025754.2-201ENST00000606491 432 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 TCL6_2.1-201ENST00000615162 119 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 ZNF658B-202ENST00000615961 3375 ntBASIC2.76□□□□□ -1.97
LONRF3Q496Y0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms