Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNU6-1305P-201ENST00000364353 104 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 RNU4-9P-201ENST00000364951 139 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 RNU6-1240P-201ENST00000365155 104 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 RNU6-1119P-201ENST00000384349 108 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 RNU6-933P-201ENST00000384424 107 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 RNU6-331P-201ENST00000384724 107 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 MIR499A-201ENST00000384903 122 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
FOXF1Q12946 RPL21P1-201ENST00000399532 476 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 RNA5SP504-201ENST00000410676 117 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.68□□□□□ -2.3
FOXF1Q12946 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 DAP3P1-201ENST00000441522 278 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 MTND3P16-201ENST00000452205 344 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.68□□□□□ -2.3
FOXF1Q12946 SRRM1P2-201ENST00000464531 1192 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 RPL39P38-201ENST00000467018 153 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.68□□□□□ -2.3
FOXF1Q12946 RN7SKP88-201ENST00000516847 250 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 MTND1P5-201ENST00000517906 940 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 AC016957.1-201ENST00000534895 309 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 AC022432.1-201ENST00000595739 310 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 AC146944.4-201ENST00000602697 718 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 AL390123.1-201ENST00000603216 237 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 SNORD11B-201ENST00000607707 90 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 AL365434.2-201ENST00000607979 234 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 7SK.8-201ENST00000612110 250 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 7SK.11-201ENST00000615477 250 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 7SK.13-201ENST00000622040 250 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 AC027335.2-201ENST00000624030 375 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 AC090582.1-201ENST00000636321 199 ntBASIC0.68□□□□□ -2.3
FOXF1Q12946 SNORD50.1-201ENST00000362987 71 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 RNU6-1085P-201ENST00000363576 107 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 U3.8-201ENST00000363675 217 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 RNU5F-3P-201ENST00000363767 117 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 Y_RNA.381-201ENST00000365666 102 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 RNU6-1042P-201ENST00000384204 107 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 SNORA25-201ENST00000384384 134 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 RNU6-1031P-201ENST00000384773 107 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
FOXF1Q12946 DEFB108C-201ENST00000400154 252 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 MIR450B-201ENST00000401182 78 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 MIR1253-201ENST00000408273 105 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 RNU6-57P-201ENST00000411348 103 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.67□□□□□ -2.3
FOXF1Q12946 ERLEC1P1-201ENST00000433806 578 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 NDUFA5P4-201ENST00000436704 385 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.67□□□□□ -2.3
FOXF1Q12946 RNU7-34P-201ENST00000459394 64 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.67□□□□□ -2.3
FOXF1Q12946 RNU6-1038P-201ENST00000516516 104 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 DEFB108E-201ENST00000524692 240 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 AC026371.1-201ENST00000551867 419 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 TPRKBP2-201ENST00000565969 475 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.67□□□□□ -2.3
FOXF1Q12946 AC119751.7-201ENST00000600494 245 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 AC021506.2-201ENST00000612354 169 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 AL513423.1-201ENST00000621695 132 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 AL359880.1-201ENST00000621879 266 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 AC097520.1-201ENST00000624435 385 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.67□□□□□ -2.3
FOXF1Q12946 MTND5P26-201ENST00000426018 1752 ntBASIC0.67□□□□□ -2.3
FOXF1Q12946 RNU6-417P-201ENST00000384712 107 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 MIR521-1-201ENST00000384902 87 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 MTCO3P40-201ENST00000392516 676 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AL356776.1-201ENST00000406574 447 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 MIR1185-2-201ENST00000408687 86 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 RN7SKP200-201ENST00000410564 320 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.66□□□□□ -2.3
FOXF1Q12946 SEPT14P3-201ENST00000439401 183 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.66□□□□□ -2.3
FOXF1Q12946 AL732372.2-207ENST00000445840 183 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AC098826.2-201ENST00000452011 651 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 SEPT14P2-201ENST00000453405 183 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 RNU7-94P-201ENST00000459576 63 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 SEPT14P4-201ENST00000513445 186 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.66□□□□□ -2.3
FOXF1Q12946 RNU6-405P-201ENST00000516637 110 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 Y_RNA.693-201ENST00000516641 110 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 RNU1-142P-201ENST00000516682 145 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 RNU7-128P-201ENST00000517247 62 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.66□□□□□ -2.3
FOXF1Q12946 FO082796.1-201ENST00000523795 183 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.66□□□□□ -2.3
FOXF1Q12946 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.66□□□□□ -2.3
FOXF1Q12946 AL162424.1-201ENST00000602325 221 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AL022345.2-201ENST00000606307 135 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 RNU6-89P-201ENST00000606519 100 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 BX284668.6-201ENST00000606899 438 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.66□□□□□ -2.3
FOXF1Q12946 AC068792.1-201ENST00000621354 417 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AC006001.4-201ENST00000622243 395 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AC006435.5-201ENST00000624486 112 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 AC068137.4-201ENST00000638485 296 ntBASIC0.66□□□□□ -2.3
FOXF1Q12946 ZNF204P-201ENST00000416749 2397 ntBASIC0.65□□□□□ -2.3
FOXF1Q12946 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
FOXF1Q12946 RNU6-254P-201ENST00000363377 107 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 Y_RNA.224-201ENST00000364308 111 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms