Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.53□□□□□ -2.16
CKAP4Q07065 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.53□□□□□ -2.16
CKAP4Q07065 AC090517.3-201ENST00000625170 141 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.17
CKAP4Q07065 MTND5P16-201ENST00000460269 1703 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 Y_RNA.28-201ENST00000362554 111 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 RNU1-76P-201ENST00000362903 159 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 RNU6-245P-201ENST00000384020 107 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 RNU6-1011P-201ENST00000384668 107 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 MIR10B-201ENST00000385011 110 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 SNORA69.1-201ENST00000390904 137 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 Y_RNA.592-201ENST00000410274 109 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.52□□□□□ -2.17
CKAP4Q07065 MCFD2P1-201ENST00000417812 300 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 EIF1P2-201ENST00000428233 350 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 MTND2P29-201ENST00000438595 412 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.52□□□□□ -2.17
CKAP4Q07065 MTND4P19-201ENST00000446659 478 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 RNU1-98P-201ENST00000458992 160 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.52□□□□□ -2.17
CKAP4Q07065 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.52□□□□□ -2.17
CKAP4Q07065 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.52□□□□□ -2.17
CKAP4Q07065 RNU6-1114P-201ENST00000516022 107 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 RNU6-475P-201ENST00000516073 104 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 RNU6-911P-201ENST00000516523 104 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 MIR2355-201ENST00000517199 87 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 RN7SKP295-201ENST00000517264 153 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CKAP4Q07065 AC144568.1-201ENST00000520139 137 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 DEFB131C-201ENST00000528817 165 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 AC026470.2-201ENST00000561492 181 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 AC022254.1-201ENST00000567857 235 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 MIR4713-201ENST00000582691 75 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 AL132822.1-201ENST00000617063 513 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.52□□□□□ -2.17
CKAP4Q07065 MIR4272-201ENST00000635924 64 ntBASIC1.52□□□□□ -2.17
CKAP4Q07065 RNU6-222P-201ENST00000362438 107 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 Y_RNA.132-201ENST00000363421 102 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 Y_RNA.148-201ENST00000363557 117 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 Y_RNA.314-201ENST00000365114 102 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 RNU6-281P-201ENST00000384212 103 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 Y_RNA.557-201ENST00000384680 107 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 MIR561-201ENST00000385216 97 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 RNA5SP212-201ENST00000391223 107 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 RN7SKP51-201ENST00000410781 304 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 U8.22-201ENST00000459141 133 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 AL163540.1-201ENST00000485382 386 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 AC132942.1-201ENST00000486753 483 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 AC022616.8-201ENST00000533569 253 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 UBL5P4-201ENST00000562584 236 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 AC074050.1-201ENST00000563247 211 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.51□□□□□ -2.17
CKAP4Q07065 AC092447.9-201ENST00000603395 144 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 SNORD58B-201ENST00000607313 66 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.51□□□□□ -2.17
CKAP4Q07065 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.51□□□□□ -2.17
CKAP4Q07065 AC007485.1-201ENST00000616755 206 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 AC005562.2-201ENST00000618264 111 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 AL606534.2-204ENST00000635008 178 ntBASIC1.51□□□□□ -2.17
CKAP4Q07065 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CKAP4Q07065 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CKAP4Q07065 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CKAP4Q07065 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CKAP4Q07065 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
CKAP4Q07065 Y_RNA.326-201ENST00000365176 113 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 Y_RNA.358-201ENST00000365491 99 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 SNORA22B-201ENST00000383876 138 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 RNU6-26P-201ENST00000383985 107 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 RNU6-546P-201ENST00000383991 107 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 RNU6-308P-201ENST00000390957 107 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AL627390.1-201ENST00000396055 340 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AC004866.1-201ENST00000411748 78 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 USP9YP16-201ENST00000430287 407 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 USP9YP23-201ENST00000455085 407 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.5□□□□□ -2.17
CKAP4Q07065 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.5□□□□□ -2.17
CKAP4Q07065 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.5□□□□□ -2.17
CKAP4Q07065 Y_RNA.661-201ENST00000516003 99 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 SNORA40.14-201ENST00000516543 86 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AC023442.1-201ENST00000531247 422 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AC090517.1-201ENST00000569307 266 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AC026271.5-201ENST00000577873 130 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.5□□□□□ -2.17
CKAP4Q07065 AC125232.2-201ENST00000592457 143 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 VN1R91P-201ENST00000594377 169 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.5□□□□□ -2.17
CKAP4Q07065 SNRPGP20-201ENST00000604477 205 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AC103810.8-201ENST00000607347 118 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.5□□□□□ -2.17
CKAP4Q07065 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 AC006157.1-201ENST00000611750 366 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 TCL6_2.1-201ENST00000615162 119 ntBASIC1.5□□□□□ -2.17
CKAP4Q07065 ZNF204P-201ENST00000416749 2397 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms