Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 RNY3P14-201ENST00000384309 102 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CSTF1Q05048 MIR1283-1-201ENST00000408494 87 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 RNU4-14P-201ENST00000410858 122 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 AC099677.2-201ENST00000436385 175 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 MTCO1P44-201ENST00000441935 243 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 SNRPGP13-201ENST00000442212 177 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 AL357134.1-201ENST00000445848 426 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.44□□□□□ -2.18
CSTF1Q05048 MTCO3P8-201ENST00000453691 755 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 MTND4P17-201ENST00000470444 350 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 RNU6-864P-201ENST00000516256 108 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 RNU6-256P-201ENST00000516747 97 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CSTF1Q05048 MIR4742-201ENST00000581069 85 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 AC018638.8-201ENST00000588755 281 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.44□□□□□ -2.18
CSTF1Q05048 AC100821.1-201ENST00000523153 2479 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 RNU6-562P-201ENST00000362731 107 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 Y_RNA.160-201ENST00000363677 92 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 RNU6-1305P-201ENST00000364353 104 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 Y_RNA.279-201ENST00000364763 95 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 MIR520A-201ENST00000384862 85 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 MIR487A-201ENST00000385009 80 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 EBAG9P1-201ENST00000418955 543 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 HSPE1P9-201ENST00000440046 311 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 AC087477.1-201ENST00000465747 340 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 AC116353.2-201ENST00000505332 712 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.43□□□□□ -2.18
CSTF1Q05048 RNU6-507P-201ENST00000516045 100 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 RNU1-117P-201ENST00000517041 158 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 RRN3P3-201ENST00000549207 578 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.43□□□□□ -2.18
CSTF1Q05048 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 AC126177.8-201ENST00000618339 1015 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.43□□□□□ -2.18
CSTF1Q05048 AC068205.3-201ENST00000636385 468 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 MTND5P9-201ENST00000503854 1755 ntBASIC1.43□□□□□ -2.18
CSTF1Q05048 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CSTF1Q05048 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CSTF1Q05048 RNU5B-2P-201ENST00000363036 113 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 Y_RNA.530-201ENST00000384587 101 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 RNU6-306P-201ENST00000384617 107 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 RNU6-331P-201ENST00000384724 107 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 MIR520E-201ENST00000384867 87 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 RNU6-876P-201ENST00000391295 104 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 MIR300-201ENST00000401138 83 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 RN7SKP51-201ENST00000410781 304 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.42□□□□□ -2.18
CSTF1Q05048 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.42□□□□□ -2.18
CSTF1Q05048 MTND4LP16-201ENST00000440828 295 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 AL353572.1-201ENST00000442490 417 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 RNU6-329P-201ENST00000459618 107 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 RNA5SP384-201ENST00000516615 116 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 AC016256.1-201ENST00000547971 354 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 FGF7P1-201ENST00000582820 288 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 MIR8076-201ENST00000611401 83 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 TCL6_2.1-201ENST00000615162 119 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 AC006001.4-201ENST00000622243 395 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 AC010615.1-201ENST00000594254 1764 ntBASIC1.42□□□□□ -2.18
CSTF1Q05048 ZNF204P-201ENST00000416749 2397 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 MTND5P10-201ENST00000603719 1809 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 Y_RNA.36-201ENST00000362602 112 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 Y_RNA.157-201ENST00000363638 102 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 SNORD114-27-201ENST00000363766 70 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 SNORD116-11-201ENST00000383882 92 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 RNU6-296P-201ENST00000384608 107 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 RNU6-1304P-201ENST00000411374 106 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 AC138393.2-201ENST00000414742 246 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.41□□□□□ -2.18
CSTF1Q05048 AC060773.1-201ENST00000421698 310 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.41□□□□□ -2.18
CSTF1Q05048 RPS29P1-201ENST00000465274 159 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 AF186996.7-201ENST00000492781 209 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 HMGN1P12-201ENST00000499125 195 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 AC011406.1-201ENST00000512440 370 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 SNORA20.3-201ENST00000516880 132 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.41□□□□□ -2.18
CSTF1Q05048 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.41□□□□□ -2.18
CSTF1Q05048 CPDP1-201ENST00000579660 283 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 MIR4801-201ENST00000582704 82 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 PVT1_3.1-201ENST00000620853 95 ntBASIC1.41□□□□□ -2.18
CSTF1Q05048 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CSTF1Q05048 AL161722.3-201ENST00000605789 2983 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 U8.1-201ENST00000362843 134 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 RNU6-271P-201ENST00000363858 105 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 SNORD81.2-201ENST00000365153 76 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.4□□□□□ -2.19
CSTF1Q05048 MIR548B-201ENST00000385247 97 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.4□□□□□ -2.19
CSTF1Q05048 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.4□□□□□ -2.19
CSTF1Q05048 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.4□□□□□ -2.19
CSTF1Q05048 COX6CP14-201ENST00000469580 174 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 Y_RNA.682-201ENST00000516457 100 ntBASIC1.4□□□□□ -2.19
CSTF1Q05048 RNA5SP437-201ENST00000517249 129 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms