Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MTND5P10-201ENST00000603719 1809 ntBASIC1.91□□□□□ -2.1
CDK3Q00526 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CDK3Q00526 MTND5P35-201ENST00000557537 1720 ntBASIC1.91□□□□□ -2.1
CDK3Q00526 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
CDK3Q00526 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.1
CDK3Q00526 Y_RNA.187-201ENST00000363918 113 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 RNU6-1235P-201ENST00000384559 107 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 MIR583-201ENST00000384846 75 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 MIR17-201ENST00000385012 84 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 MIR559-201ENST00000385188 96 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 RNA5SP501-201ENST00000410990 112 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 AC114482.1-201ENST00000418010 247 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 MTND2P29-201ENST00000438595 412 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 IPO7P1-201ENST00000442031 636 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 RNU6-717P-201ENST00000459076 104 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 RNU6-498P-201ENST00000459468 107 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.9□□□□□ -2.11
CDK3Q00526 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 RNU6-295P-201ENST00000516901 104 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 RNU6-856P-201ENST00000516959 98 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 SUMO2P18-201ENST00000518873 252 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 AC110588.1-201ENST00000559699 137 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.9□□□□□ -2.11
CDK3Q00526 AL117336.2-201ENST00000602435 335 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
CDK3Q00526 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDK3Q00526 RNA5SP361-201ENST00000362686 118 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 RNU4-79P-201ENST00000362764 141 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 RNU6-490P-201ENST00000362985 107 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 Y_RNA.146-201ENST00000363549 102 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 SNORA69.1-201ENST00000390904 137 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 RNU6-57P-201ENST00000411348 103 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 AC022028.1-201ENST00000412054 408 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 AL445685.2-201ENST00000422551 342 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 MRPS18CP6-201ENST00000423587 223 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.89□□□□□ -2.11
CDK3Q00526 RNU7-152P-201ENST00000458982 64 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.89□□□□□ -2.11
CDK3Q00526 RNU7-4P-201ENST00000516961 62 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 RNU6-699P-201ENST00000517081 110 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 AC005786.1-201ENST00000588553 154 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
CDK3Q00526 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.89□□□□□ -2.11
CDK3Q00526 AC073544.1-201ENST00000600110 1595 ntBASIC1.89□□□□□ -2.11
CDK3Q00526 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDK3Q00526 Y_RNA.314-201ENST00000365114 102 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 MIR329-1-201ENST00000385028 80 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 MIR548B-201ENST00000385247 97 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 AL512604.1-201ENST00000404812 257 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 Y_RNA.595-201ENST00000410403 105 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 RNU2-20P-201ENST00000410425 191 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 Y_RNA.604-201ENST00000410574 102 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.88□□□□□ -2.11
CDK3Q00526 AC060773.1-201ENST00000421698 310 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 ATP5J2P3-201ENST00000451550 258 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.88□□□□□ -2.11
CDK3Q00526 RNU7-169P-201ENST00000459456 61 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 RNU6-1041P-201ENST00000516254 102 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 RNVU1-2-201ENST00000516326 135 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 RNU6-107P-201ENST00000516643 102 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.88□□□□□ -2.11
CDK3Q00526 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.88□□□□□ -2.11
CDK3Q00526 AK6P2-201ENST00000549020 471 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.88□□□□□ -2.11
CDK3Q00526 MIR3124-201ENST00000582636 67 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 AC080078.3-201ENST00000605407 463 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 AC087588.2-201ENST00000617667 426 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 U1.36-201ENST00000620684 176 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 AC006001.4-201ENST00000622243 395 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 snoZ196.1-201ENST00000625269 89 ntBASIC1.88□□□□□ -2.11
CDK3Q00526 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 U3.8-201ENST00000363675 217 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 RNY3P11-201ENST00000364153 102 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 MIR764-201ENST00000390811 85 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CDK3Q00526 Y_RNA.605-201ENST00000410577 105 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 AF228730.4-201ENST00000421457 183 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 AL591806.2-201ENST00000433122 173 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.87□□□□□ -2.11
CDK3Q00526 RPL23AP3-201ENST00000453844 468 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 AC079804.2-201ENST00000490376 200 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 AC144568.1-201ENST00000520139 137 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 AC008555.8-201ENST00000623602 2168 ntBASIC1.87□□□□□ -2.11
CDK3Q00526 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CDK3Q00526 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CDK3Q00526 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CDK3Q00526 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CDK3Q00526 RNU6-318P-201ENST00000384283 103 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 SNORA48.1-201ENST00000390879 135 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 Y_RNA.592-201ENST00000410274 109 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 HMGN2P38-201ENST00000423806 265 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 AL353689.1-201ENST00000438895 199 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 AC099799.1-201ENST00000439809 192 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 AC003989.2-201ENST00000440224 169 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms