Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 Y_RNA.146-201ENST00000363549 102 ntBASIC1.89□□□□□ -2.11
IRX4P78413 Y_RNA.419-201ENST00000384041 102 ntBASIC1.89□□□□□ -2.11
IRX4P78413 Y_RNA.535-201ENST00000384612 99 ntBASIC1.89□□□□□ -2.11
IRX4P78413 MIR559-201ENST00000385188 96 ntBASIC1.89□□□□□ -2.11
IRX4P78413 Y_RNA.579-201ENST00000390939 94 ntBASIC1.89□□□□□ -2.11
IRX4P78413 RNU4-62P-201ENST00000410125 130 ntBASIC1.89□□□□□ -2.11
IRX4P78413 AP1B1P2-201ENST00000416196 106 ntBASIC1.89□□□□□ -2.11
IRX4P78413 AC007098.1-201ENST00000420122 367 ntBASIC1.89□□□□□ -2.11
IRX4P78413 HMGN2P18-201ENST00000450680 270 ntBASIC1.89□□□□□ -2.11
IRX4P78413 RNU7-87P-201ENST00000459343 62 ntBASIC1.89□□□□□ -2.11
IRX4P78413 AC105758.1-201ENST00000506038 399 ntBASIC1.89□□□□□ -2.11
IRX4P78413 RNU6-470P-201ENST00000515954 104 ntBASIC1.89□□□□□ -2.11
IRX4P78413 RNU5F-4P-201ENST00000516581 114 ntBASIC1.89□□□□□ -2.11
IRX4P78413 RNU6-1098P-201ENST00000516772 96 ntBASIC1.89□□□□□ -2.11
IRX4P78413 AC026470.2-201ENST00000561492 181 ntBASIC1.89□□□□□ -2.11
IRX4P78413 UBL5P4-201ENST00000562584 236 ntBASIC1.89□□□□□ -2.11
IRX4P78413 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.89□□□□□ -2.11
IRX4P78413 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
IRX4P78413 AL050343.2-201ENST00000607338 280 ntBASIC1.89□□□□□ -2.11
IRX4P78413 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.89□□□□□ -2.11
IRX4P78413 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.89□□□□□ -2.11
IRX4P78413 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
IRX4P78413 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.89□□□□□ -2.11
IRX4P78413 Y_RNA.106-201ENST00000363189 100 ntBASIC1.88□□□□□ -2.11
IRX4P78413 Y_RNA.187-201ENST00000363918 113 ntBASIC1.88□□□□□ -2.11
IRX4P78413 MIR499A-201ENST00000384903 122 ntBASIC1.88□□□□□ -2.11
IRX4P78413 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
IRX4P78413 MIR190B-201ENST00000401119 79 ntBASIC1.88□□□□□ -2.11
IRX4P78413 MRPS18CP6-201ENST00000423587 223 ntBASIC1.88□□□□□ -2.11
IRX4P78413 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
IRX4P78413 USP9YP16-201ENST00000430287 407 ntBASIC1.88□□□□□ -2.11
IRX4P78413 AL353689.1-201ENST00000438895 199 ntBASIC1.88□□□□□ -2.11
IRX4P78413 AL035666.1-201ENST00000446195 348 ntBASIC1.88□□□□□ -2.11
IRX4P78413 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.88□□□□□ -2.11
IRX4P78413 USP9YP23-201ENST00000455085 407 ntBASIC1.88□□□□□ -2.11
IRX4P78413 AC007215.1-201ENST00000464893 276 ntBASIC1.88□□□□□ -2.11
IRX4P78413 ATP5EP1-201ENST00000510257 156 ntBASIC1.88□□□□□ -2.11
IRX4P78413 TRMT112P2-201ENST00000512910 132 ntBASIC1.88□□□□□ -2.11
IRX4P78413 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.88□□□□□ -2.11
IRX4P78413 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
IRX4P78413 RNU2-44P-201ENST00000516795 194 ntBASIC1.88□□□□□ -2.11
IRX4P78413 RNU6-58P-201ENST00000517143 103 ntBASIC1.88□□□□□ -2.11
IRX4P78413 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
IRX4P78413 MIR5006-201ENST00000583027 110 ntBASIC1.88□□□□□ -2.11
IRX4P78413 MIR8081-201ENST00000611533 95 ntBASIC1.88□□□□□ -2.11
IRX4P78413 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
IRX4P78413 AC006026.1-201ENST00000444025 1803 ntBASIC1.87□□□□□ -2.11
IRX4P78413 RNU1-76P-201ENST00000362903 159 ntBASIC1.87□□□□□ -2.11
IRX4P78413 RNU6-873P-201ENST00000363833 107 ntBASIC1.87□□□□□ -2.11
IRX4P78413 SNORD115-8-201ENST00000363856 82 ntBASIC1.87□□□□□ -2.11
IRX4P78413 SNORD115-38-201ENST00000365037 82 ntBASIC1.87□□□□□ -2.11
IRX4P78413 Y_RNA.315-201ENST00000365117 102 ntBASIC1.87□□□□□ -2.11
IRX4P78413 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
IRX4P78413 AL357139.1-201ENST00000407792 426 ntBASIC1.87□□□□□ -2.11
IRX4P78413 MIR320B2-201ENST00000408479 138 ntBASIC1.87□□□□□ -2.11
IRX4P78413 AC004386.2-201ENST00000441858 148 ntBASIC1.87□□□□□ -2.11
IRX4P78413 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.87□□□□□ -2.11
IRX4P78413 MTCO3P8-201ENST00000453691 755 ntBASIC1.87□□□□□ -2.11
IRX4P78413 RNA5SP54-201ENST00000516951 92 ntBASIC1.87□□□□□ -2.11
IRX4P78413 RNA5SP490-201ENST00000517141 136 ntBASIC1.87□□□□□ -2.11
IRX4P78413 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.87□□□□□ -2.11
IRX4P78413 SUB1P3-201ENST00000564581 315 ntBASIC1.87□□□□□ -2.11
IRX4P78413 MIR5695-201ENST00000579717 85 ntBASIC1.87□□□□□ -2.11
IRX4P78413 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.87□□□□□ -2.11
IRX4P78413 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.87□□□□□ -2.11
IRX4P78413 SNRPGP20-201ENST00000604477 205 ntBASIC1.87□□□□□ -2.11
IRX4P78413 AL359821.1-201ENST00000605519 182 ntBASIC1.87□□□□□ -2.11
IRX4P78413 SDR42E1P4-201ENST00000620894 481 ntBASIC1.87□□□□□ -2.11
IRX4P78413 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
IRX4P78413 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
IRX4P78413 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
IRX4P78413 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
IRX4P78413 MTND5P16-201ENST00000460269 1703 ntBASIC1.86□□□□□ -2.11
IRX4P78413 BX322639.1-202ENST00000423987 2213 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RNU1-58P-201ENST00000362413 163 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RNU6-1115P-201ENST00000362490 106 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RNU6-490P-201ENST00000362985 107 ntBASIC1.86□□□□□ -2.11
IRX4P78413 SNORD114-6-201ENST00000364393 72 ntBASIC1.86□□□□□ -2.11
IRX4P78413 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
IRX4P78413 Y_RNA.431-201ENST00000384086 102 ntBASIC1.86□□□□□ -2.11
IRX4P78413 Y_RNA.460-201ENST00000384255 102 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RNU6-1026P-201ENST00000384465 108 ntBASIC1.86□□□□□ -2.11
IRX4P78413 Y_RNA.577-201ENST00000384794 101 ntBASIC1.86□□□□□ -2.11
IRX4P78413 AC004866.1-201ENST00000411748 78 ntBASIC1.86□□□□□ -2.11
IRX4P78413 AL158823.1-201ENST00000418441 478 ntBASIC1.86□□□□□ -2.11
IRX4P78413 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RPL23AP6-201ENST00000446637 472 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RNU7-14P-201ENST00000459331 62 ntBASIC1.86□□□□□ -2.11
IRX4P78413 AC027575.1-201ENST00000481064 460 ntBASIC1.86□□□□□ -2.11
IRX4P78413 AL163540.1-201ENST00000485382 386 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RPS23P5-201ENST00000495419 428 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RNU6-1114P-201ENST00000516022 107 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RNU6-1198P-201ENST00000516904 67 ntBASIC1.86□□□□□ -2.11
IRX4P78413 RNU6-699P-201ENST00000517081 110 ntBASIC1.86□□□□□ -2.11
IRX4P78413 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.86□□□□□ -2.11
IRX4P78413 AL627230.6-201ENST00000611129 280 ntBASIC1.86□□□□□ -2.11
IRX4P78413 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.86□□□□□ -2.11
IRX4P78413 TCL6_2.1-201ENST00000615162 119 ntBASIC1.86□□□□□ -2.11
IRX4P78413 AL160413.1-201ENST00000622780 310 ntBASIC1.86□□□□□ -2.11
IRX4P78413 AC090574.1-201ENST00000623186 233 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms