Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SNORA31.16-201ENST00000516773 139 ntBASIC1.95□□□□□ -2.1
LMO4P61968 MIR1273D-201ENST00000577266 86 ntBASIC1.95□□□□□ -2.1
LMO4P61968 MIR4423-201ENST00000580922 80 ntBASIC1.95□□□□□ -2.1
LMO4P61968 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.95□□□□□ -2.1
LMO4P61968 AC098479.1-201ENST00000609225 154 ntBASIC1.95□□□□□ -2.1
LMO4P61968 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.95□□□□□ -2.1
LMO4P61968 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.95□□□□□ -2.1
LMO4P61968 AC137590.2-201ENST00000619709 240 ntBASIC1.95□□□□□ -2.1
LMO4P61968 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LMO4P61968 AC127459.3-201ENST00000624328 466 ntBASIC1.95□□□□□ -2.1
LMO4P61968 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.95□□□□□ -2.1
LMO4P61968 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LMO4P61968 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
LMO4P61968 RNU4-90P-201ENST00000362773 141 ntBASIC1.94□□□□□ -2.1
LMO4P61968 RNU6-137P-201ENST00000363680 108 ntBASIC1.94□□□□□ -2.1
LMO4P61968 RNU6-280P-201ENST00000364145 104 ntBASIC1.94□□□□□ -2.1
LMO4P61968 RNA5SP125-201ENST00000364843 120 ntBASIC1.94□□□□□ -2.1
LMO4P61968 Y_RNA.785-201ENST00000384290 109 ntBASIC1.94□□□□□ -2.1
LMO4P61968 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LMO4P61968 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LMO4P61968 RNA5SP390-201ENST00000410191 113 ntBASIC1.94□□□□□ -2.1
LMO4P61968 RNU2-63P-201ENST00000410792 194 ntBASIC1.94□□□□□ -2.1
LMO4P61968 AL139156.1-201ENST00000412785 841 ntBASIC1.94□□□□□ -2.1
LMO4P61968 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.94□□□□□ -2.1
LMO4P61968 AC019205.3-201ENST00000424573 156 ntBASIC1.94□□□□□ -2.1
LMO4P61968 AC078809.1-201ENST00000427601 140 ntBASIC1.94□□□□□ -2.1
LMO4P61968 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.94□□□□□ -2.1
LMO4P61968 AC140059.1-201ENST00000489238 361 ntBASIC1.94□□□□□ -2.1
LMO4P61968 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.94□□□□□ -2.1
LMO4P61968 SERF1AP1-201ENST00000514575 187 ntBASIC1.94□□□□□ -2.1
LMO4P61968 RNU6-567P-201ENST00000516746 107 ntBASIC1.94□□□□□ -2.1
LMO4P61968 AC021231.3-201ENST00000558497 370 ntBASIC1.94□□□□□ -2.1
LMO4P61968 AC105137.2-201ENST00000569073 466 ntBASIC1.94□□□□□ -2.1
LMO4P61968 MIR4643-201ENST00000577473 78 ntBASIC1.94□□□□□ -2.1
LMO4P61968 MIR4648-201ENST00000580107 72 ntBASIC1.94□□□□□ -2.1
LMO4P61968 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.94□□□□□ -2.1
LMO4P61968 MIR5007-201ENST00000583098 95 ntBASIC1.94□□□□□ -2.1
LMO4P61968 BX284668.6-201ENST00000606899 438 ntBASIC1.94□□□□□ -2.1
LMO4P61968 AL365434.2-201ENST00000607979 234 ntBASIC1.94□□□□□ -2.1
LMO4P61968 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.94□□□□□ -2.1
LMO4P61968 MIR6715A-201ENST00000615929 79 ntBASIC1.94□□□□□ -2.1
LMO4P61968 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LMO4P61968 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.94□□□□□ -2.1
LMO4P61968 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
LMO4P61968 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LMO4P61968 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LMO4P61968 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.93□□□□□ -2.1
LMO4P61968 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.93□□□□□ -2.1
LMO4P61968 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.93□□□□□ -2.1
LMO4P61968 AC002543.1-201ENST00000299783 1954 ntBASIC1.93□□□□□ -2.1
LMO4P61968 RNU6-873P-201ENST00000363833 107 ntBASIC1.93□□□□□ -2.1
LMO4P61968 RNU6-961P-201ENST00000363893 105 ntBASIC1.93□□□□□ -2.1
LMO4P61968 RNU6-1145P-201ENST00000384246 107 ntBASIC1.93□□□□□ -2.1
LMO4P61968 MIR549A-201ENST00000385268 96 ntBASIC1.93□□□□□ -2.1
LMO4P61968 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LMO4P61968 RPS26P42-201ENST00000413485 326 ntBASIC1.93□□□□□ -2.1
LMO4P61968 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.93□□□□□ -2.1
LMO4P61968 AC012306.1-201ENST00000423267 114 ntBASIC1.93□□□□□ -2.1
LMO4P61968 PIGPP3-201ENST00000425307 415 ntBASIC1.93□□□□□ -2.1
LMO4P61968 SUMO1P4-201ENST00000429430 302 ntBASIC1.93□□□□□ -2.1
LMO4P61968 RPS12P2-201ENST00000439728 269 ntBASIC1.93□□□□□ -2.1
LMO4P61968 RPL39P40-201ENST00000445481 146 ntBASIC1.93□□□□□ -2.1
LMO4P61968 snoU13.15-201ENST00000459407 104 ntBASIC1.93□□□□□ -2.1
LMO4P61968 AC073901.1-201ENST00000462471 408 ntBASIC1.93□□□□□ -2.1
LMO4P61968 SNORA40.9-201ENST00000515895 93 ntBASIC1.93□□□□□ -2.1
LMO4P61968 Y_RNA.700-201ENST00000516806 100 ntBASIC1.93□□□□□ -2.1
LMO4P61968 SNORA81.3-201ENST00000517283 198 ntBASIC1.93□□□□□ -2.1
LMO4P61968 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.93□□□□□ -2.1
LMO4P61968 MIR5194-201ENST00000582634 120 ntBASIC1.93□□□□□ -2.1
LMO4P61968 AL138963.2-201ENST00000605137 226 ntBASIC1.93□□□□□ -2.1
LMO4P61968 AL357075.2-201ENST00000614906 189 ntBASIC1.93□□□□□ -2.1
LMO4P61968 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.93□□□□□ -2.1
LMO4P61968 MIR5739-201ENST00000619803 80 ntBASIC1.93□□□□□ -2.1
LMO4P61968 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.93□□□□□ -2.1
LMO4P61968 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LMO4P61968 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LMO4P61968 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.92□□□□□ -2.1
LMO4P61968 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LMO4P61968 RNU1-91P-201ENST00000364746 163 ntBASIC1.92□□□□□ -2.1
LMO4P61968 Y_RNA.297-201ENST00000364950 91 ntBASIC1.92□□□□□ -2.1
LMO4P61968 RNA5SP240-201ENST00000365355 128 ntBASIC1.92□□□□□ -2.1
LMO4P61968 RNU6-1062P-201ENST00000383908 107 ntBASIC1.92□□□□□ -2.1
LMO4P61968 RNU6-20P-201ENST00000384106 107 ntBASIC1.92□□□□□ -2.1
LMO4P61968 Y_RNA.570-201ENST00000384750 101 ntBASIC1.92□□□□□ -2.1
LMO4P61968 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.92□□□□□ -2.1
LMO4P61968 HMGN2P35-201ENST00000412164 270 ntBASIC1.92□□□□□ -2.1
LMO4P61968 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.92□□□□□ -2.1
LMO4P61968 AC003685.2-201ENST00000422795 395 ntBASIC1.92□□□□□ -2.1
LMO4P61968 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.92□□□□□ -2.1
LMO4P61968 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
LMO4P61968 CYP2C59P-201ENST00000457790 269 ntBASIC1.92□□□□□ -2.1
LMO4P61968 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.92□□□□□ -2.1
LMO4P61968 RNU6-182P-201ENST00000516970 105 ntBASIC1.92□□□□□ -2.1
LMO4P61968 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.92□□□□□ -2.1
LMO4P61968 AK6P2-201ENST00000549020 471 ntBASIC1.92□□□□□ -2.1
LMO4P61968 RRN3P3-201ENST00000549207 578 ntBASIC1.92□□□□□ -2.1
LMO4P61968 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.92□□□□□ -2.1
LMO4P61968 SNORD113-5-201ENST00000607261 78 ntBASIC1.92□□□□□ -2.1
LMO4P61968 FTX_2.1-201ENST00000618816 94 ntBASIC1.92□□□□□ -2.1
LMO4P61968 SNORD98-201ENST00000636377 67 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms