Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 Y_RNA.812-201ENST00000610788 101 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 Y_RNA.784-201ENST00000613803 101 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 Y_RNA.787-201ENST00000616522 101 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN2P57739 Y_RNA.780-201ENST00000617336 101 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 Y_RNA.801-201ENST00000619005 101 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.17□□□□□ -2.06
CLDN2P57739 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN2P57739 AC091812.1-201ENST00000432235 1948 ntBASIC2.17□□□□□ -2.06
CLDN2P57739 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN2P57739 Y_RNA.326-201ENST00000365176 113 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 RNU6-639P-201ENST00000384074 107 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 RNU6-160P-201ENST00000384591 107 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN2P57739 MRPL35P1-201ENST00000404272 572 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 AL590004.1-201ENST00000405321 300 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 SUMO1P4-201ENST00000429430 302 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 HMGN2P3-201ENST00000433603 273 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 HMGN2P5-201ENST00000436882 273 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 AL357134.1-201ENST00000445848 426 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN2P57739 AC067942.3-201ENST00000512025 362 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 SNORA40.9-201ENST00000515895 93 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 RNU6-948P-201ENST00000516374 107 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 AC022616.4-201ENST00000522985 181 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 AC040926.1-201ENST00000530195 238 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 AL390123.1-201ENST00000603216 237 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 AL121655.1-201ENST00000605811 308 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 SNORD14A-201ENST00000606526 91 ntBASIC2.16□□□□□ -2.06
CLDN2P57739 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
CLDN2P57739 SNORD87-201ENST00000364849 89 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 SNORA63.7-201ENST00000365579 123 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 SNORA51.11-201ENST00000384442 131 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 RNU6-1235P-201ENST00000384559 107 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 RNA5SP270-201ENST00000411361 118 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 TOMM22P2-201ENST00000430735 237 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 MTCO1P44-201ENST00000441935 243 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN2P57739 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN2P57739 RNU1-131P-201ENST00000458943 161 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 RNU6-498P-201ENST00000459468 107 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 RNU7-57P-201ENST00000459540 60 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 AC010531.2-201ENST00000465012 153 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.15□□□□□ -2.07
CLDN2P57739 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN2P57739 AC018448.1-201ENST00000552843 316 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN2P57739 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN2P57739 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
CLDN2P57739 AL357075.2-201ENST00000614906 189 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 AC010205.1-201ENST00000616668 449 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 AC009831.4-201ENST00000620744 325 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.15□□□□□ -2.07
CLDN2P57739 U6.92-201ENST00000636464 89 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 LINC02555-201ENST00000563933 1951 ntBASIC2.15□□□□□ -2.07
CLDN2P57739 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLDN2P57739 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLDN2P57739 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN2P57739 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN2P57739 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
CLDN2P57739 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN2P57739 MIR410-201ENST00000362222 80 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 RNU6-1264P-201ENST00000383891 107 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 RNU6-708P-201ENST00000384217 107 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 Y_RNA.645-201ENST00000391229 102 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 RNU6-101P-201ENST00000410323 104 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN2P57739 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN2P57739 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN2P57739 SCARNA16.3-201ENST00000516595 184 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 Y_RNA.713-201ENST00000517013 96 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 AC022202.1-201ENST00000613515 211 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 snoZ196.1-201ENST00000625269 89 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.14□□□□□ -2.07
CLDN2P57739 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CLDN2P57739 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CLDN2P57739 Y_RNA.498-201ENST00000384460 102 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 MIR524-201ENST00000385242 87 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 MIR548B-201ENST00000385247 97 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 ELOCP21-201ENST00000412558 336 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 AC139712.2-201ENST00000424302 339 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 RNU6-625P-201ENST00000459412 107 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 AC010469.2-201ENST00000496412 480 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN2P57739 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 AK6P2-201ENST00000549020 471 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 MIR4659A-201ENST00000580269 81 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 AC006504.6-201ENST00000590142 199 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 AC104695.3-201ENST00000604052 296 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 AC124312.5-201ENST00000604451 268 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN2P57739 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms