Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.04□□□□□ -2.08
CLDN20P56880 ZNF658B-202ENST00000615961 3375 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 MTND4P1-201ENST00000457501 1466 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CLDN20P56880 U3.8-201ENST00000363675 217 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 Y_RNA.422-201ENST00000384054 114 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 RNU6-975P-201ENST00000384296 105 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 MIR29C-201ENST00000385231 88 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 Y_RNA.645-201ENST00000391229 102 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN20P56880 RN7SL429P-201ENST00000479090 223 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 RN7SL489P-201ENST00000486185 223 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 RN7SL327P-201ENST00000488659 223 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 SNORA40.9-201ENST00000515895 93 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 RNU2-34P-201ENST00000516534 121 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 Y_RNA.721-201ENST00000517207 102 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN20P56880 AC040926.1-201ENST00000530195 238 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 AC009127.3-201ENST00000570531 403 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 Y_RNA.812-201ENST00000610788 101 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 Y_RNA.784-201ENST00000613803 101 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 AL357075.2-201ENST00000614906 189 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 Y_RNA.787-201ENST00000616522 101 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN20P56880 RN7SL853P-201ENST00000617250 223 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 Y_RNA.780-201ENST00000617336 101 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 Y_RNA.801-201ENST00000619005 101 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 U6.92-201ENST00000636464 89 ntBASIC2.03□□□□□ -2.08
CLDN20P56880 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN20P56880 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
CLDN20P56880 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN20P56880 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN20P56880 RNU6-639P-201ENST00000384074 107 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 SNORA40.19-201ENST00000390846 128 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 MRPL35P1-201ENST00000404272 572 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 RNA5SP270-201ENST00000411361 118 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 HMGN2P38-201ENST00000423806 265 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 MTCO1P44-201ENST00000441935 243 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 AC010531.2-201ENST00000465012 153 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 AC067942.3-201ENST00000512025 362 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 RNU6-948P-201ENST00000516374 107 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 AC022616.4-201ENST00000522985 181 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 AK6P2-201ENST00000549020 471 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN20P56880 AL390123.1-201ENST00000603216 237 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 MIR203B-201ENST00000636080 86 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 AC009487.4-201ENST00000624969 3585 ntBASIC2.02□□□□□ -2.09
CLDN20P56880 AP006437.1-201ENST00000641440 3685 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN20P56880 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN20P56880 MIR340-201ENST00000362125 95 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 RNU4-50P-201ENST00000364361 141 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 RNU6-1235P-201ENST00000384559 107 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 RNU6-160P-201ENST00000384591 107 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 MIR548B-201ENST00000385247 97 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN20P56880 AL590004.1-201ENST00000405321 300 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 ELOCP21-201ENST00000412558 336 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 AL357134.1-201ENST00000445848 426 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN20P56880 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN20P56880 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 RNU6-498P-201ENST00000459468 107 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 AC010469.2-201ENST00000496412 480 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 AC018448.1-201ENST00000552843 316 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 AC104695.3-201ENST00000604052 296 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN20P56880 AL121655.1-201ENST00000605811 308 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 AC040896.1-201ENST00000613819 479 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.01□□□□□ -2.09
CLDN20P56880 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN20P56880 LINC02555-201ENST00000563933 1951 ntBASIC2.01□□□□□ -2.09
CLDN20P56880 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2□□□□□ -2.09
CLDN20P56880 RNU6-1164P-201ENST00000364428 107 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
CLDN20P56880 SNORA63.7-201ENST00000365579 123 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNU6-1264P-201ENST00000383891 107 ntBASIC2□□□□□ -2.09
CLDN20P56880 Y_RNA.389-201ENST00000383924 113 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNU6-418P-201ENST00000384035 107 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNU6-926P-201ENST00000384075 107 ntBASIC2□□□□□ -2.09
CLDN20P56880 Y_RNA.498-201ENST00000384460 102 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNU6-101P-201ENST00000410323 104 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNA5SP425-201ENST00000410336 112 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
CLDN20P56880 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
CLDN20P56880 AL135786.1-201ENST00000415892 214 ntBASIC2□□□□□ -2.09
CLDN20P56880 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2□□□□□ -2.09
CLDN20P56880 AC139712.2-201ENST00000424302 339 ntBASIC2□□□□□ -2.09
CLDN20P56880 AL356320.1-201ENST00000429616 163 ntBASIC2□□□□□ -2.09
CLDN20P56880 TRAPPC2P8-201ENST00000440676 396 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNU1-131P-201ENST00000458943 161 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNU6-625P-201ENST00000459412 107 ntBASIC2□□□□□ -2.09
CLDN20P56880 RNU7-57P-201ENST00000459540 60 ntBASIC2□□□□□ -2.09
CLDN20P56880 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2□□□□□ -2.09
CLDN20P56880 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms