Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6-856P-201ENST00000516959 98 ntBASIC1.69□□□□□ -2.14
PEX3P56589 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.69□□□□□ -2.14
PEX3P56589 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.69□□□□□ -2.14
PEX3P56589 RRN3P3-201ENST00000549207 578 ntBASIC1.69□□□□□ -2.14
PEX3P56589 FRG2DP-202ENST00000566967 323 ntBASIC1.69□□□□□ -2.14
PEX3P56589 AC005899.2-201ENST00000584353 90 ntBASIC1.69□□□□□ -2.14
PEX3P56589 MIR1302-1-201ENST00000637932 143 ntBASIC1.69□□□□□ -2.14
PEX3P56589 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PEX3P56589 ZNF72P-201ENST00000425869 1908 ntBASIC1.69□□□□□ -2.14
PEX3P56589 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
PEX3P56589 RNA5SP276-201ENST00000362580 94 ntBASIC1.68□□□□□ -2.14
PEX3P56589 Y_RNA.70-201ENST00000362886 110 ntBASIC1.68□□□□□ -2.14
PEX3P56589 Y_RNA.106-201ENST00000363189 100 ntBASIC1.68□□□□□ -2.14
PEX3P56589 RNU6-60P-201ENST00000364792 103 ntBASIC1.68□□□□□ -2.14
PEX3P56589 RNU6-975P-201ENST00000384296 105 ntBASIC1.68□□□□□ -2.14
PEX3P56589 Y_RNA.529-201ENST00000384586 119 ntBASIC1.68□□□□□ -2.14
PEX3P56589 MIR517C-201ENST00000385103 95 ntBASIC1.68□□□□□ -2.14
PEX3P56589 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.68□□□□□ -2.14
PEX3P56589 EIF1P2-201ENST00000428233 350 ntBASIC1.68□□□□□ -2.14
PEX3P56589 MTCO3P10-201ENST00000455912 772 ntBASIC1.68□□□□□ -2.14
PEX3P56589 AC091179.3-201ENST00000474761 144 ntBASIC1.68□□□□□ -2.14
PEX3P56589 RNU6-559P-201ENST00000516151 98 ntBASIC1.68□□□□□ -2.14
PEX3P56589 GNAI2P1-201ENST00000541815 315 ntBASIC1.68□□□□□ -2.14
PEX3P56589 AC015720.1-201ENST00000565251 277 ntBASIC1.68□□□□□ -2.14
PEX3P56589 AC125232.2-201ENST00000592457 143 ntBASIC1.68□□□□□ -2.14
PEX3P56589 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PEX3P56589 ZNF702P-202ENST00000434269 1966 ntBASIC1.68□□□□□ -2.14
PEX3P56589 RNU6-23P-201ENST00000363283 107 ntBASIC1.67□□□□□ -2.14
PEX3P56589 RNU6-438P-201ENST00000365561 103 ntBASIC1.67□□□□□ -2.14
PEX3P56589 Y_RNA.387-201ENST00000383918 102 ntBASIC1.67□□□□□ -2.14
PEX3P56589 RNU6-890P-201ENST00000384121 107 ntBASIC1.67□□□□□ -2.14
PEX3P56589 RNU6-1297P-201ENST00000384415 104 ntBASIC1.67□□□□□ -2.14
PEX3P56589 RNU6-1026P-201ENST00000384465 108 ntBASIC1.67□□□□□ -2.14
PEX3P56589 SNORA48.1-201ENST00000390879 135 ntBASIC1.67□□□□□ -2.14
PEX3P56589 RNU6-1009P-201ENST00000390996 107 ntBASIC1.67□□□□□ -2.14
PEX3P56589 SNORA67.6-201ENST00000391093 99 ntBASIC1.67□□□□□ -2.14
PEX3P56589 RNY4P36-201ENST00000391116 96 ntBASIC1.67□□□□□ -2.14
PEX3P56589 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
PEX3P56589 MIR190B-201ENST00000401119 79 ntBASIC1.67□□□□□ -2.14
PEX3P56589 MTCYBP4-201ENST00000401524 249 ntBASIC1.67□□□□□ -2.14
PEX3P56589 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
PEX3P56589 MTCYBP10-201ENST00000424905 650 ntBASIC1.67□□□□□ -2.14
PEX3P56589 AC108667.1-201ENST00000428618 249 ntBASIC1.67□□□□□ -2.14
PEX3P56589 AL445305.1-201ENST00000432577 575 ntBASIC1.67□□□□□ -2.14
PEX3P56589 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.67□□□□□ -2.14
PEX3P56589 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.67□□□□□ -2.14
PEX3P56589 RPL17P19-201ENST00000489069 552 ntBASIC1.67□□□□□ -2.14
PEX3P56589 AC093303.1-201ENST00000514549 295 ntBASIC1.67□□□□□ -2.14
PEX3P56589 RNU6-120P-201ENST00000516077 103 ntBASIC1.67□□□□□ -2.14
PEX3P56589 RNU2-34P-201ENST00000516534 121 ntBASIC1.67□□□□□ -2.14
PEX3P56589 Y_RNA.706-201ENST00000516933 99 ntBASIC1.67□□□□□ -2.14
PEX3P56589 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.67□□□□□ -2.14
PEX3P56589 SUB1P3-201ENST00000564581 315 ntBASIC1.67□□□□□ -2.14
PEX3P56589 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.67□□□□□ -2.14
PEX3P56589 AL355375.2-201ENST00000574825 175 ntBASIC1.67□□□□□ -2.14
PEX3P56589 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.67□□□□□ -2.14
PEX3P56589 SNORD11B-201ENST00000607707 90 ntBASIC1.67□□□□□ -2.14
PEX3P56589 PISRT1.1-201ENST00000616930 107 ntBASIC1.67□□□□□ -2.14
PEX3P56589 AL359697.1-201ENST00000624879 587 ntBASIC1.67□□□□□ -2.14
PEX3P56589 AC068205.3-201ENST00000636385 468 ntBASIC1.67□□□□□ -2.14
PEX3P56589 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PEX3P56589 RNU6-661P-201ENST00000362409 107 ntBASIC1.66□□□□□ -2.14
PEX3P56589 RNA5SP432-201ENST00000362480 116 ntBASIC1.66□□□□□ -2.14
PEX3P56589 Y_RNA.140-201ENST00000363474 103 ntBASIC1.66□□□□□ -2.14
PEX3P56589 Y_RNA.364-201ENST00000365532 101 ntBASIC1.66□□□□□ -2.14
PEX3P56589 RNU6-281P-201ENST00000384212 103 ntBASIC1.66□□□□□ -2.14
PEX3P56589 RNU6-1235P-201ENST00000384559 107 ntBASIC1.66□□□□□ -2.14
PEX3P56589 SNORA8-201ENST00000384574 139 ntBASIC1.66□□□□□ -2.14
PEX3P56589 AL117342.1-201ENST00000404861 406 ntBASIC1.66□□□□□ -2.14
PEX3P56589 MIR320B2-201ENST00000408479 138 ntBASIC1.66□□□□□ -2.14
PEX3P56589 RNA5SP501-201ENST00000410990 112 ntBASIC1.66□□□□□ -2.14
PEX3P56589 RNU6-1304P-201ENST00000411374 106 ntBASIC1.66□□□□□ -2.14
PEX3P56589 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.66□□□□□ -2.14
PEX3P56589 AF228730.4-201ENST00000421457 183 ntBASIC1.66□□□□□ -2.14
PEX3P56589 U8.22-201ENST00000459141 133 ntBASIC1.66□□□□□ -2.14
PEX3P56589 RNU6-498P-201ENST00000459468 107 ntBASIC1.66□□□□□ -2.14
PEX3P56589 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PEX3P56589 RNU6-237P-201ENST00000515985 71 ntBASIC1.66□□□□□ -2.14
PEX3P56589 SNORA25.14-201ENST00000516481 132 ntBASIC1.66□□□□□ -2.14
PEX3P56589 RNU6-307P-201ENST00000516743 106 ntBASIC1.66□□□□□ -2.14
PEX3P56589 Y_RNA.718-201ENST00000517110 102 ntBASIC1.66□□□□□ -2.14
PEX3P56589 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.66□□□□□ -2.14
PEX3P56589 AC093027.1-201ENST00000546698 429 ntBASIC1.66□□□□□ -2.14
PEX3P56589 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
PEX3P56589 AC004584.2-201ENST00000570407 410 ntBASIC1.66□□□□□ -2.14
PEX3P56589 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.66□□□□□ -2.14
PEX3P56589 AC005786.1-201ENST00000588553 154 ntBASIC1.66□□□□□ -2.14
PEX3P56589 AL117336.2-201ENST00000602435 335 ntBASIC1.66□□□□□ -2.14
PEX3P56589 7SK.7-201ENST00000603504 247 ntBASIC1.66□□□□□ -2.14
PEX3P56589 AL353149.1-201ENST00000610667 244 ntBASIC1.66□□□□□ -2.14
PEX3P56589 AC112487.2-201ENST00000637950 304 ntBASIC1.66□□□□□ -2.14
PEX3P56589 RNU4-42P-201ENST00000364738 142 ntBASIC1.65□□□□□ -2.15
PEX3P56589 RNU6-418P-201ENST00000384035 107 ntBASIC1.65□□□□□ -2.15
PEX3P56589 MIR559-201ENST00000385188 96 ntBASIC1.65□□□□□ -2.15
PEX3P56589 RNU11-3P-201ENST00000391111 133 ntBASIC1.65□□□□□ -2.15
PEX3P56589 RNU4-62P-201ENST00000410125 130 ntBASIC1.65□□□□□ -2.15
PEX3P56589 AL158823.1-201ENST00000418441 478 ntBASIC1.65□□□□□ -2.15
PEX3P56589 MTND4LP11-201ENST00000422184 280 ntBASIC1.65□□□□□ -2.15
PEX3P56589 USP9YP16-201ENST00000430287 407 ntBASIC1.65□□□□□ -2.15
PEX3P56589 NDUFB4P10-201ENST00000452541 359 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms