Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL357139.1-201ENST00000407792 426 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 Y_RNA.605-201ENST00000410577 105 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 RNA5SP504-201ENST00000410676 117 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 AC114482.1-201ENST00000418010 247 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 DPH3P2-201ENST00000422618 250 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.3□□□□□ -2.04
HDAC4P56524 AC004386.2-201ENST00000441858 148 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.3□□□□□ -2.04
HDAC4P56524 SNORA25.10-201ENST00000515926 124 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 RNU6-911P-201ENST00000516523 104 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 RNU5F-4P-201ENST00000516581 114 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 RNA5SP137-201ENST00000516833 135 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 AC022868.1-201ENST00000517767 391 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 RNU6-988P-201ENST00000519081 107 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.3□□□□□ -2.04
HDAC4P56524 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.3□□□□□ -2.04
HDAC4P56524 MIR4680-201ENST00000580906 66 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 VN1R91P-201ENST00000594377 169 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 AL357075.2-201ENST00000614906 189 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 TCL6_2.1-201ENST00000615162 119 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 AC005592.1-201ENST00000566527 1640 ntBASIC2.3□□□□□ -2.04
HDAC4P56524 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HDAC4P56524 Y_RNA.39-201ENST00000362620 98 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 RNU6-743P-201ENST00000364151 106 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 RNU6-245P-201ENST00000384020 107 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 SNORA67.2-201ENST00000384300 149 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 MIR764-201ENST00000390811 85 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC4P56524 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.29□□□□□ -2.04
HDAC4P56524 AC091179.3-201ENST00000474761 144 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 AC010469.2-201ENST00000496412 480 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.29□□□□□ -2.04
HDAC4P56524 RNU6-475P-201ENST00000516073 104 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 SNORA25.14-201ENST00000516481 132 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 SNORA40.14-201ENST00000516543 86 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 RNU2-44P-201ENST00000516795 194 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 NDUFA5P6-201ENST00000542110 379 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 AC093023.1-201ENST00000547375 507 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.29□□□□□ -2.04
HDAC4P56524 AL442163.3-201ENST00000554110 156 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 AC078899.2-201ENST00000595282 212 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 MZT1P2-201ENST00000604387 248 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.29□□□□□ -2.04
HDAC4P56524 AC022202.1-201ENST00000613515 211 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.29□□□□□ -2.04
HDAC4P56524 AC005296.1-201ENST00000616145 209 ntBASIC2.29□□□□□ -2.04
HDAC4P56524 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HDAC4P56524 AL359851.1-201ENST00000569460 4997 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 SNORA63-201ENST00000363450 132 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 RNU5F-3P-201ENST00000363767 117 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 RNU6-280P-201ENST00000364145 104 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 RNU6-1145P-201ENST00000384246 107 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HDAC4P56524 MIR1289-2-201ENST00000408360 111 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.28□□□□□ -2.04
HDAC4P56524 AL137159.1-201ENST00000452808 512 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 RPS23P5-201ENST00000495419 428 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 RNA5SP200-201ENST00000516360 103 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.28□□□□□ -2.04
HDAC4P56524 GNAI2P1-201ENST00000541815 315 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 AK6P2-201ENST00000549020 471 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 MIR5006-201ENST00000583027 110 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 AC007229.1-201ENST00000590455 412 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 AL353997.5-201ENST00000618886 171 ntBASIC2.28□□□□□ -2.04
HDAC4P56524 CENPCP1-201ENST00000533085 2578 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 Y_RNA.158-201ENST00000363651 101 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 SNORA63C-201ENST00000364578 129 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 RNY3P4-201ENST00000384428 101 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 AC113618.1-201ENST00000416747 285 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 HMGN2P3-201ENST00000433603 273 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 HMGN2P5-201ENST00000436882 273 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 AC009237.7-201ENST00000447357 229 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 RNA5SP490-201ENST00000517141 136 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 SNORA31.25-201ENST00000517242 134 ntBASIC2.27□□□□□ -2.05
HDAC4P56524 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.27□□□□□ -2.05
HDAC4P56524 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HDAC4P56524 RNU6-879P-201ENST00000364328 108 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 RNU6-450P-201ENST00000364654 107 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 RNU6-1026P-201ENST00000384465 108 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 SRIP3-201ENST00000413200 219 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 AL356379.1-201ENST00000414105 126 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HDAC4P56524 RNU7-14P-201ENST00000459331 62 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 SCARNA16.3-201ENST00000516595 184 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 MIR2355-201ENST00000517199 87 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 AL442663.2-201ENST00000554385 511 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 AC233702.2-202ENST00000562547 291 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.26□□□□□ -2.05
HDAC4P56524 AC010999.1-201ENST00000611856 324 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 U6.92-201ENST00000636464 89 ntBASIC2.26□□□□□ -2.05
HDAC4P56524 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HDAC4P56524 RNA5SP99-201ENST00000364020 114 ntBASIC2.25□□□□□ -2.05
HDAC4P56524 RNA5SP37-201ENST00000365420 130 ntBASIC2.25□□□□□ -2.05
HDAC4P56524 Y_RNA.527-201ENST00000384573 102 ntBASIC2.25□□□□□ -2.05
HDAC4P56524 SNORA40.19-201ENST00000390846 128 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms