Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SNORA8.3-201ENST00000384679 139 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 MIR518C-201ENST00000384822 101 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
GFRA1P56159 AC123900.1-201ENST00000420390 96 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 AL357134.1-201ENST00000445848 426 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 BX510359.1-201ENST00000456973 237 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 RNU7-141P-201ENST00000459304 62 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 AC010531.2-201ENST00000465012 153 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 AC021205.2-201ENST00000480069 347 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.98□□□□□ -1.93
GFRA1P56159 AC091826.1-201ENST00000514065 313 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 SNORA4.4-201ENST00000515921 135 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 RNU6-1219P-201ENST00000516143 112 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.98□□□□□ -1.93
GFRA1P56159 AL161756.2-201ENST00000604597 246 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 AC090115.4-201ENST00000609970 188 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 AL449363.1-201ENST00000617815 186 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
GFRA1P56159 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
GFRA1P56159 RNU1-70P-201ENST00000362618 164 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 RN7SKP51-201ENST00000410781 304 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 AC010409.1-201ENST00000487382 476 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 RNA5SP20-201ENST00000515976 84 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 RNU6-1278P-201ENST00000516130 107 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 SUMO2P18-201ENST00000518873 252 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.97□□□□□ -1.93
GFRA1P56159 MIR5680-201ENST00000577577 84 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.97□□□□□ -1.93
GFRA1P56159 Y_RNA.802-201ENST00000614892 130 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 SNORA50A-202ENST00000629536 136 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 MIR3651-201ENST00000630427 90 ntBASIC2.97□□□□□ -1.93
GFRA1P56159 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
GFRA1P56159 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.97□□□□□ -1.93
GFRA1P56159 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.97□□□□□ -1.93
GFRA1P56159 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.97□□□□□ -1.93
GFRA1P56159 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
GFRA1P56159 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
GFRA1P56159 Y_RNA.121-201ENST00000363309 113 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 Y_RNA.238-201ENST00000364441 102 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 Y_RNA.332-201ENST00000365271 113 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 RNU2-2P-201ENST00000410396 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 RN7SKP220-201ENST00000410611 288 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.96□□□□□ -1.94
GFRA1P56159 RNU6-667P-201ENST00000517186 102 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 MRPS18CP4-201ENST00000535821 231 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 MIR4425-201ENST00000580572 84 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 RNU2-4P-201ENST00000606190 192 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.15-201ENST00000611544 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 uc_338.1-201ENST00000612113 180 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.16-201ENST00000613119 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.12-201ENST00000613778 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.9-201ENST00000615427 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.11-201ENST00000616345 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.2-201ENST00000616535 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.96□□□□□ -1.94
GFRA1P56159 U2.3-201ENST00000617785 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.19-201ENST00000618602 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 RNU2-1-201ENST00000618664 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.6-201ENST00000619225 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.5-201ENST00000619465 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 U2.10-201ENST00000620268 191 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 AC068647.2-201ENST00000637380 353 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.96□□□□□ -1.94
GFRA1P56159 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.96□□□□□ -1.94
GFRA1P56159 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
GFRA1P56159 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
GFRA1P56159 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.96□□□□□ -1.94
GFRA1P56159 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
GFRA1P56159 RNA5SP125-201ENST00000364843 120 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 RNU6-144P-201ENST00000383951 107 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 RNU6-746P-201ENST00000384112 109 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 MIR627-201ENST00000384979 97 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 RNU2-48P-201ENST00000410694 191 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 RNU4-47P-201ENST00000410876 114 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 MTCO1P44-201ENST00000441935 243 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 RPS27P22-201ENST00000478056 241 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.95□□□□□ -1.94
GFRA1P56159 RN7SKP164-201ENST00000516138 266 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 MIR2276-201ENST00000516886 89 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 AC021269.2-201ENST00000532318 330 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 MIR548AY-201ENST00000617669 107 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.95□□□□□ -1.94
GFRA1P56159 AL021368.2-201ENST00000606125 5352 ntBASIC2.95□□□□□ -1.94
GFRA1P56159 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
GFRA1P56159 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.94□□□□□ -1.94
GFRA1P56159 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
GFRA1P56159 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
GFRA1P56159 MIR30E-201ENST00000362104 92 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 Y_RNA.172-201ENST00000363765 102 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 SNORA38.1-201ENST00000364172 131 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 SNORD116-13-201ENST00000384408 92 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 RNU6-381P-201ENST00000391259 108 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 RNA5SP229-201ENST00000410809 99 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 AC016909.1-201ENST00000415916 166 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 RPL23AP83-201ENST00000434984 473 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 CR769767.1-201ENST00000436337 346 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 AC006028.1-201ENST00000438379 402 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 AL445687.1-201ENST00000439946 251 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 AC091021.1-201ENST00000468051 388 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 RPL36AP21-201ENST00000490372 323 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms