Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 FO393415.2-201ENST00000480085 343 ntBASIC1.63□□□□□ -2.15
VCPP55072 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.63□□□□□ -2.15
VCPP55072 MTND5P5-201ENST00000503764 376 ntBASIC1.63□□□□□ -2.15
VCPP55072 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.63□□□□□ -2.15
VCPP55072 MIR5696-201ENST00000578474 85 ntBASIC1.63□□□□□ -2.15
VCPP55072 MIR4273-201ENST00000582824 84 ntBASIC1.63□□□□□ -2.15
VCPP55072 AC011712.1-201ENST00000588959 234 ntBASIC1.63□□□□□ -2.15
VCPP55072 SNRPGP20-201ENST00000604477 205 ntBASIC1.63□□□□□ -2.15
VCPP55072 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.63□□□□□ -2.15
VCPP55072 AL353770.2-201ENST00000620024 78 ntBASIC1.63□□□□□ -2.15
VCPP55072 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.63□□□□□ -2.15
VCPP55072 AL133216.2-202ENST00000634512 349 ntBASIC1.63□□□□□ -2.15
VCPP55072 BX322639.1-202ENST00000423987 2213 ntBASIC1.63□□□□□ -2.15
VCPP55072 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VCPP55072 Y_RNA.72-201ENST00000362894 103 ntBASIC1.62□□□□□ -2.15
VCPP55072 Y_RNA.132-201ENST00000363421 102 ntBASIC1.62□□□□□ -2.15
VCPP55072 SNORD115-32-201ENST00000364079 82 ntBASIC1.62□□□□□ -2.15
VCPP55072 RNU6-338P-201ENST00000383888 105 ntBASIC1.62□□□□□ -2.15
VCPP55072 MIR32-201ENST00000384965 70 ntBASIC1.62□□□□□ -2.15
VCPP55072 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.62□□□□□ -2.15
VCPP55072 USP9YP30-201ENST00000430729 455 ntBASIC1.62□□□□□ -2.15
VCPP55072 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.62□□□□□ -2.15
VCPP55072 AC009237.7-201ENST00000447357 229 ntBASIC1.62□□□□□ -2.15
VCPP55072 snoU13.30-201ENST00000458951 104 ntBASIC1.62□□□□□ -2.15
VCPP55072 AC010531.2-201ENST00000465012 153 ntBASIC1.62□□□□□ -2.15
VCPP55072 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.62□□□□□ -2.15
VCPP55072 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.62□□□□□ -2.15
VCPP55072 AP003033.1-201ENST00000527244 415 ntBASIC1.62□□□□□ -2.15
VCPP55072 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.62□□□□□ -2.15
VCPP55072 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.62□□□□□ -2.15
VCPP55072 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.62□□□□□ -2.15
VCPP55072 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.62□□□□□ -2.15
VCPP55072 ZNF204P-201ENST00000416749 2397 ntBASIC1.62□□□□□ -2.15
VCPP55072 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
VCPP55072 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VCPP55072 MTND4P5-201ENST00000435821 1374 ntBASIC1.61□□□□□ -2.15
VCPP55072 RNU6-1059P-201ENST00000363752 98 ntBASIC1.61□□□□□ -2.15
VCPP55072 RNU6-439P-201ENST00000384188 106 ntBASIC1.61□□□□□ -2.15
VCPP55072 MIR320B2-201ENST00000408479 138 ntBASIC1.61□□□□□ -2.15
VCPP55072 MIR1283-1-201ENST00000408494 87 ntBASIC1.61□□□□□ -2.15
VCPP55072 AC004866.1-201ENST00000411748 78 ntBASIC1.61□□□□□ -2.15
VCPP55072 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VCPP55072 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.61□□□□□ -2.15
VCPP55072 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.61□□□□□ -2.15
VCPP55072 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.61□□□□□ -2.15
VCPP55072 RNA5SP54-201ENST00000516951 92 ntBASIC1.61□□□□□ -2.15
VCPP55072 RRN3P3-201ENST00000549207 578 ntBASIC1.61□□□□□ -2.15
VCPP55072 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.61□□□□□ -2.15
VCPP55072 AC005786.1-201ENST00000588553 154 ntBASIC1.61□□□□□ -2.15
VCPP55072 AL359697.1-201ENST00000624879 587 ntBASIC1.61□□□□□ -2.15
VCPP55072 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
VCPP55072 CASC19-280ENST00000642102 1351 ntBASIC1.6□□□□□ -2.15
VCPP55072 SNORD115-8-201ENST00000363856 82 ntBASIC1.6□□□□□ -2.15
VCPP55072 RNU4-13P-201ENST00000364019 141 ntBASIC1.6□□□□□ -2.15
VCPP55072 SNORD115-38-201ENST00000365037 82 ntBASIC1.6□□□□□ -2.15
VCPP55072 Y_RNA.533-201ENST00000384596 114 ntBASIC1.6□□□□□ -2.15
VCPP55072 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
VCPP55072 MIR548K-201ENST00000408406 116 ntBASIC1.6□□□□□ -2.15
VCPP55072 NCOR1P3-201ENST00000420479 303 ntBASIC1.6□□□□□ -2.15
VCPP55072 AC243428.1-201ENST00000421099 264 ntBASIC1.6□□□□□ -2.15
VCPP55072 AC112492.4-201ENST00000456549 352 ntBASIC1.6□□□□□ -2.15
VCPP55072 SNORD5.1-201ENST00000458800 75 ntBASIC1.6□□□□□ -2.15
VCPP55072 RPS29P1-201ENST00000465274 159 ntBASIC1.6□□□□□ -2.15
VCPP55072 RNU6-1198P-201ENST00000516904 67 ntBASIC1.6□□□□□ -2.15
VCPP55072 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.6□□□□□ -2.15
VCPP55072 MIR4753-201ENST00000585119 83 ntBASIC1.6□□□□□ -2.15
VCPP55072 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.6□□□□□ -2.15
VCPP55072 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.6□□□□□ -2.15
VCPP55072 AC022513.1-201ENST00000624512 117 ntBASIC1.6□□□□□ -2.15
VCPP55072 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.15
VCPP55072 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
VCPP55072 RNU1-93P-201ENST00000364704 169 ntBASIC1.59□□□□□ -2.15
VCPP55072 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.59□□□□□ -2.15
VCPP55072 RNU6-418P-201ENST00000384035 107 ntBASIC1.59□□□□□ -2.15
VCPP55072 RNU6-842P-201ENST00000384269 107 ntBASIC1.59□□□□□ -2.15
VCPP55072 MIR520E-201ENST00000384867 87 ntBASIC1.59□□□□□ -2.15
VCPP55072 MIR625-201ENST00000385047 85 ntBASIC1.59□□□□□ -2.15
VCPP55072 MIR153-2-201ENST00000385225 87 ntBASIC1.59□□□□□ -2.15
VCPP55072 MIR548F5-201ENST00000408421 86 ntBASIC1.59□□□□□ -2.15
VCPP55072 AC074085.1-201ENST00000413598 418 ntBASIC1.59□□□□□ -2.15
VCPP55072 MTND1P2-201ENST00000430604 821 ntBASIC1.59□□□□□ -2.15
VCPP55072 AL357134.1-201ENST00000445848 426 ntBASIC1.59□□□□□ -2.15
VCPP55072 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.59□□□□□ -2.15
VCPP55072 RPL30P10-201ENST00000488148 337 ntBASIC1.59□□□□□ -2.15
VCPP55072 AC067942.3-201ENST00000512025 362 ntBASIC1.59□□□□□ -2.15
VCPP55072 AC046134.1-201ENST00000514454 666 ntBASIC1.59□□□□□ -2.15
VCPP55072 RNU6-58P-201ENST00000517143 103 ntBASIC1.59□□□□□ -2.15
VCPP55072 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.59□□□□□ -2.15
VCPP55072 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.59□□□□□ -2.15
VCPP55072 7SK.7-201ENST00000603504 247 ntBASIC1.59□□□□□ -2.15
VCPP55072 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.59□□□□□ -2.15
VCPP55072 AC245060.5-201ENST00000610778 3293 ntBASIC1.58□□□□□ -2.16
VCPP55072 AL159152.1-201ENST00000635019 2587 ntBASIC1.58□□□□□ -2.16
VCPP55072 RNU1-22P-201ENST00000363334 158 ntBASIC1.58□□□□□ -2.16
VCPP55072 Y_RNA.319-201ENST00000365138 92 ntBASIC1.58□□□□□ -2.16
VCPP55072 RNU6-767P-201ENST00000384132 107 ntBASIC1.58□□□□□ -2.16
VCPP55072 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
VCPP55072 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
VCPP55072 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VCPP55072 AC005908.1-201ENST00000468701 347 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms