Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 RNA5SP511-201ENST00000410487 115 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 RNU6-994P-201ENST00000410507 111 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.08□□□□□ -2.4
NKX2-5P52952 AC105313.1-201ENST00000509121 353 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 RNU1-117P-201ENST00000517041 158 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 RNA5SP454-201ENST00000517231 127 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
NKX2-5P52952 MIR4509-3-201ENST00000578671 94 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 MIR4509-2-201ENST00000583920 94 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.08□□□□□ -2.4
NKX2-5P52952 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.08□□□□□ -2.4
NKX2-5P52952 MIR4509-1-201ENST00000618224 94 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 MTND4P4-201ENST00000439033 1366 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 SNORA25.3-201ENST00000363205 127 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 RNU5F-7P-201ENST00000363696 115 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 RNU6-74P-201ENST00000384235 107 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 RNU6-906P-201ENST00000384700 70 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 AL355143.1-201ENST00000407101 841 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 RNU6-177P-201ENST00000411257 104 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 SCARNA18-201ENST00000459004 134 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 GMFBP1-201ENST00000467831 427 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 AC091951.3-201ENST00000504093 246 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.07□□□□□ -2.4
NKX2-5P52952 AP003072.2-201ENST00000527756 676 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
NKX2-5P52952 MIR4703-201ENST00000577728 79 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 AL117336.2-201ENST00000602435 335 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 SCARNA4-201ENST00000629045 128 ntBASIC0.07□□□□□ -2.4
NKX2-5P52952 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.07□□□□□ -2.4
NKX2-5P52952 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
NKX2-5P52952 Y_RNA.399-201ENST00000383955 105 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 MIR562-201ENST00000384894 95 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 SNORD111-201ENST00000408139 94 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 MTCO2P34-201ENST00000421994 607 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 RPS29P15-201ENST00000458329 171 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 RNU6-1037P-201ENST00000459571 107 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 AC092989.1-201ENST00000481235 277 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 RNU2-56P-201ENST00000516826 190 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 RNU2-46P-201ENST00000517038 113 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 RNU6-430P-201ENST00000517078 107 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 MTND2P32-201ENST00000521584 1038 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.06□□□□□ -2.4
NKX2-5P52952 SNORD11B-201ENST00000607707 90 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 AL138726.1-201ENST00000614873 333 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.06□□□□□ -2.4
NKX2-5P52952 MIR6515-201ENST00000619843 57 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 AC139792.3-201ENST00000623525 224 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 MIR924-201ENST00000638017 53 ntBASIC0.06□□□□□ -2.4
NKX2-5P52952 RNU6-1097P-201ENST00000363586 107 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 RNU4-45P-201ENST00000365469 141 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
NKX2-5P52952 MIR1185-2-201ENST00000408687 86 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.05□□□□□ -2.4
NKX2-5P52952 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.05□□□□□ -2.4
NKX2-5P52952 MTCO2P18-201ENST00000457151 658 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 AP000870.1-201ENST00000472927 406 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 NDUFA4P2-201ENST00000489989 244 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 AC010469.2-201ENST00000496412 480 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 RPL39P5-202ENST00000512505 151 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 AP003716.2-201ENST00000528260 108 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.05□□□□□ -2.4
NKX2-5P52952 MIR4438-201ENST00000585271 93 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 7SK.7-201ENST00000603504 247 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 RAC1P9-201ENST00000604990 392 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 MIR98-201ENST00000606724 119 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 AC008133.2-201ENST00000624540 351 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 MIR6079-201ENST00000635807 62 ntBASIC0.05□□□□□ -2.4
NKX2-5P52952 SNORD44.1-201ENST00000363202 61 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 RNU6-1297P-201ENST00000384415 104 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 MIR518E-201ENST00000385252 88 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 RNA5SP219-201ENST00000390940 113 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.04□□□□□ -2.4
NKX2-5P52952 RPL31P35-201ENST00000431058 377 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 USP9YP29-201ENST00000445112 563 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 RNU7-167P-201ENST00000459160 62 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.04□□□□□ -2.4
NKX2-5P52952 RNU6-58P-201ENST00000517143 103 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.04□□□□□ -2.4
NKX2-5P52952 AC122133.1-201ENST00000613964 233 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 AC137590.2-201ENST00000619709 240 ntBASIC0.04□□□□□ -2.4
NKX2-5P52952 ZNF204P-201ENST00000416749 2397 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 SNORD114-23-201ENST00000363536 72 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 RNU6-108P-201ENST00000365558 107 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 SNORA40.4-201ENST00000390971 128 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 RNA5SP482-201ENST00000391269 118 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 MIR1827-201ENST00000408549 66 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 Y_RNA.598-201ENST00000410480 95 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.03□□□□□ -2.4
NKX2-5P52952 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.03□□□□□ -2.4
NKX2-5P52952 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.03□□□□□ -2.4
NKX2-5P52952 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.03□□□□□ -2.4
NKX2-5P52952 NDUFB4P10-201ENST00000452541 359 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.03□□□□□ -2.4
NKX2-5P52952 RPS29P27-201ENST00000463711 170 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.03□□□□□ -2.4
NKX2-5P52952 RNU6-1116P-201ENST00000517269 99 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.03□□□□□ -2.4
NKX2-5P52952 AF235103.2-201ENST00000525753 346 ntBASIC0.03□□□□□ -2.4
NKX2-5P52952 MTND4P33-201ENST00000556706 766 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms