Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CLCNKAP51800 U6.92-201ENST00000636464 89 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
CLCNKAP51800 Y_RNA.27-201ENST00000362540 103 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLCNKAP51800 Y_RNA.415-201ENST00000384012 112 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 RNU6-1160P-201ENST00000384546 104 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 AL033519.2-201ENST00000403958 392 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 SNORD12B-201ENST00000410433 91 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 RNA5SP504-201ENST00000410676 117 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.16□□□□□ -2.06
CLCNKAP51800 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLCNKAP51800 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.16□□□□□ -2.06
CLCNKAP51800 RPS23P5-201ENST00000495419 428 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 Y_RNA.683-201ENST00000516508 93 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.16□□□□□ -2.06
CLCNKAP51800 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.16□□□□□ -2.06
CLCNKAP51800 AC124312.5-201ENST00000604451 268 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 MTND5P35-201ENST00000557537 1720 ntBASIC2.16□□□□□ -2.06
CLCNKAP51800 ZNF355P-201ENST00000427301 3216 ntBASIC2.15□□□□□ -2.06
CLCNKAP51800 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CLCNKAP51800 RNU1-62P-201ENST00000362599 164 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 RNU6-545P-201ENST00000362681 104 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 SNORD87-201ENST00000364849 89 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 Y_RNA.422-201ENST00000384054 114 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 Y_RNA.455-201ENST00000384230 98 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 RNU6-1145P-201ENST00000384246 107 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 RNU6-101P-201ENST00000410323 104 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 SNORA4.4-201ENST00000515921 135 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 RNU6-991P-201ENST00000516168 107 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 RNU6-344P-201ENST00000516635 111 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 RN7SKP49-201ENST00000516675 260 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.15□□□□□ -2.07
CLCNKAP51800 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.15□□□□□ -2.07
CLCNKAP51800 RRN3P3-201ENST00000549207 578 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 RPS29P30-201ENST00000600975 111 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.15□□□□□ -2.07
CLCNKAP51800 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.14□□□□□ -2.07
CLCNKAP51800 Y_RNA.162-201ENST00000363683 102 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 RNU5F-3P-201ENST00000363767 117 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 SNORD78.2-201ENST00000391076 69 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 SNORA11.4-201ENST00000408823 129 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 MTND2P23-201ENST00000422990 651 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCNKAP51800 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 RPS29P21-201ENST00000496272 170 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 RNU6-764P-201ENST00000516396 105 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 RNA5SP490-201ENST00000517141 136 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 SNORA31.25-201ENST00000517242 134 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCNKAP51800 AC113195.1-201ENST00000579952 141 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 AL390123.1-201ENST00000603216 237 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 RPL17P51-201ENST00000605218 238 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 AC025754.2-201ENST00000606491 432 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 SNORD11B-201ENST00000607707 90 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLCNKAP51800 AC008555.8-201ENST00000623602 2168 ntBASIC2.14□□□□□ -2.07
CLCNKAP51800 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CLCNKAP51800 AL596028.1-201ENST00000326971 197 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 RNU6-1026P-201ENST00000384465 108 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 RNU6-738P-201ENST00000384531 106 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 SNORA40.19-201ENST00000390846 128 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 RNU6-985P-201ENST00000410182 104 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 Y_RNA.595-201ENST00000410403 105 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 RN7SKP284-201ENST00000411002 343 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 EDDM3CP-201ENST00000415977 425 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.13□□□□□ -2.07
CLCNKAP51800 UQCRBP2-201ENST00000447827 297 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 HMGN2P18-201ENST00000450680 270 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.13□□□□□ -2.07
CLCNKAP51800 AC093852.1-201ENST00000503587 266 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
CLCNKAP51800 SNORA40.9-201ENST00000515895 93 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 RNU6-327P-201ENST00000516270 127 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 RNU6-1012P-201ENST00000516606 109 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 Y_RNA.715-201ENST00000517082 110 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 Y_RNA.721-201ENST00000517207 102 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 RNU2-19P-201ENST00000517288 84 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 AC034114.1-201ENST00000520293 285 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 AC022616.4-201ENST00000522985 181 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 MIR4659A-201ENST00000580269 81 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 AC116312.1-201ENST00000606841 314 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 PART1_1.1-201ENST00000611761 217 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.13□□□□□ -2.07
CLCNKAP51800 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
CLCNKAP51800 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CLCNKAP51800 Y_RNA.153-201ENST00000363615 91 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 RNU6-1305P-201ENST00000364353 104 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 RNU4-50P-201ENST00000364361 141 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 SNORA67.2-201ENST00000384300 149 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 Y_RNA.471-201ENST00000384312 102 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 Y_RNA.526-201ENST00000384572 110 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 RNU6-130P-201ENST00000411112 103 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms