Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 SNORD11-201ENST00000459124 84 ntBASIC4.14□□□□□ -1.75
CLK2P49760 RPL21P129-201ENST00000491732 478 ntBASIC4.14□□□□□ -1.75
CLK2P49760 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.14□□□□□ -1.75
CLK2P49760 PHBP14-201ENST00000512887 367 ntBASIC4.14□□□□□ -1.75
CLK2P49760 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.14□□□□□ -1.75
CLK2P49760 MIR7515-201ENST00000637837 67 ntBASIC4.14□□□□□ -1.75
CLK2P49760 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.14□□□□□ -1.75
CLK2P49760 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLK2P49760 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLK2P49760 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CLK2P49760 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.14□□□□□ -1.75
CLK2P49760 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.13□□□□□ -1.75
CLK2P49760 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLK2P49760 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLK2P49760 MAPK10-322ENST00000641485 4530 ntBASIC4.13□□□□□ -1.75
CLK2P49760 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CLK2P49760 SNORA63.4-201ENST00000362763 126 ntBASIC4.13□□□□□ -1.75
CLK2P49760 Y_RNA.91-201ENST00000363042 107 ntBASIC4.13□□□□□ -1.75
CLK2P49760 RNU1-18P-201ENST00000363062 164 ntBASIC4.13□□□□□ -1.75
CLK2P49760 RNU6-743P-201ENST00000364151 106 ntBASIC4.13□□□□□ -1.75
CLK2P49760 SNORA62.3-201ENST00000365110 153 ntBASIC4.13□□□□□ -1.75
CLK2P49760 SNORD6-201ENST00000365444 73 ntBASIC4.13□□□□□ -1.75
CLK2P49760 SNORD18B-201ENST00000365659 72 ntBASIC4.13□□□□□ -1.75
CLK2P49760 RNY4P18-201ENST00000391107 89 ntBASIC4.13□□□□□ -1.75
CLK2P49760 RN7SKP18-201ENST00000516005 275 ntBASIC4.13□□□□□ -1.75
CLK2P49760 SNORA70.18-201ENST00000516696 98 ntBASIC4.13□□□□□ -1.75
CLK2P49760 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.13□□□□□ -1.75
CLK2P49760 MIR4662B-201ENST00000579498 81 ntBASIC4.13□□□□□ -1.75
CLK2P49760 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.13□□□□□ -1.75
CLK2P49760 JPX_2.1-201ENST00000614161 69 ntBASIC4.13□□□□□ -1.75
CLK2P49760 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CLK2P49760 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
CLK2P49760 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLK2P49760 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLK2P49760 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLK2P49760 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.12□□□□□ -1.75
CLK2P49760 RNU6-1209P-201ENST00000363655 107 ntBASIC4.12□□□□□ -1.75
CLK2P49760 Y_RNA.796-201ENST00000364268 102 ntBASIC4.12□□□□□ -1.75
CLK2P49760 Y_RNA.799-201ENST00000364992 102 ntBASIC4.12□□□□□ -1.75
CLK2P49760 RNU1-89P-201ENST00000384592 164 ntBASIC4.12□□□□□ -1.75
CLK2P49760 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.12□□□□□ -1.75
CLK2P49760 AL161788.1-201ENST00000441805 169 ntBASIC4.12□□□□□ -1.75
CLK2P49760 MTCO1P44-201ENST00000441935 243 ntBASIC4.12□□□□□ -1.75
CLK2P49760 AC025750.2-201ENST00000442609 450 ntBASIC4.12□□□□□ -1.75
CLK2P49760 CYP2C59P-201ENST00000457790 269 ntBASIC4.12□□□□□ -1.75
CLK2P49760 SNORD105B-201ENST00000458770 79 ntBASIC4.12□□□□□ -1.75
CLK2P49760 SEM1P1-201ENST00000506694 209 ntBASIC4.12□□□□□ -1.75
CLK2P49760 RN7SKP83-201ENST00000516512 178 ntBASIC4.12□□□□□ -1.75
CLK2P49760 RNU6-579P-201ENST00000516879 102 ntBASIC4.12□□□□□ -1.75
CLK2P49760 RNA5SP143-201ENST00000516936 115 ntBASIC4.12□□□□□ -1.75
CLK2P49760 CYCSP26-201ENST00000534107 320 ntBASIC4.12□□□□□ -1.75
CLK2P49760 MIR4429-201ENST00000580105 73 ntBASIC4.12□□□□□ -1.75
CLK2P49760 MIR3922-201ENST00000585192 84 ntBASIC4.12□□□□□ -1.75
CLK2P49760 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLK2P49760 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLK2P49760 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.12□□□□□ -1.75
CLK2P49760 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CLK2P49760 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CLK2P49760 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
CLK2P49760 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLK2P49760 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLK2P49760 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.11□□□□□ -1.75
CLK2P49760 RNA5SP322-201ENST00000363617 119 ntBASIC4.11□□□□□ -1.75
CLK2P49760 RNA5SP42-201ENST00000364278 115 ntBASIC4.11□□□□□ -1.75
CLK2P49760 CD24P4-201ENST00000382840 243 ntBASIC4.11□□□□□ -1.75
CLK2P49760 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLK2P49760 SNORA48.7-201ENST00000391302 135 ntBASIC4.11□□□□□ -1.75
CLK2P49760 MLLT10P1-201ENST00000418346 262 ntBASIC4.11□□□□□ -1.75
CLK2P49760 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.11□□□□□ -1.75
CLK2P49760 AL158147.1-201ENST00000443970 75 ntBASIC4.11□□□□□ -1.75
CLK2P49760 Y_RNA.709-201ENST00000516952 92 ntBASIC4.11□□□□□ -1.75
CLK2P49760 PRELID2P1-201ENST00000552837 301 ntBASIC4.11□□□□□ -1.75
CLK2P49760 AC133485.4-201ENST00000561835 220 ntBASIC4.11□□□□□ -1.75
CLK2P49760 AC138907.4-201ENST00000570107 226 ntBASIC4.11□□□□□ -1.75
CLK2P49760 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.11□□□□□ -1.75
CLK2P49760 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLK2P49760 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLK2P49760 Y_RNA.280-201ENST00000364765 112 ntBASIC4.1□□□□□ -1.75
CLK2P49760 MIR562-201ENST00000384894 95 ntBASIC4.1□□□□□ -1.75
CLK2P49760 AC123900.1-201ENST00000420390 96 ntBASIC4.1□□□□□ -1.75
CLK2P49760 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.1□□□□□ -1.75
CLK2P49760 OR9P1P-201ENST00000496431 281 ntBASIC4.1□□□□□ -1.75
CLK2P49760 RNU7-149P-201ENST00000516739 59 ntBASIC4.1□□□□□ -1.75
CLK2P49760 RNU6-856P-201ENST00000516959 98 ntBASIC4.1□□□□□ -1.75
CLK2P49760 Pinc.1-201ENST00000616452 154 ntBASIC4.1□□□□□ -1.75
CLK2P49760 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLK2P49760 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
CLK2P49760 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLK2P49760 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLK2P49760 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.09□□□□□ -1.75
CLK2P49760 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.09□□□□□ -1.75
CLK2P49760 Y_RNA.114-201ENST00000363265 113 ntBASIC4.09□□□□□ -1.75
CLK2P49760 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.09□□□□□ -1.75
CLK2P49760 RNU6-1138P-201ENST00000365359 106 ntBASIC4.09□□□□□ -1.75
CLK2P49760 MIR520G-201ENST00000385064 90 ntBASIC4.09□□□□□ -1.75
CLK2P49760 MIR591-201ENST00000385290 95 ntBASIC4.09□□□□□ -1.75
CLK2P49760 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.09□□□□□ -1.75
CLK2P49760 AP001486.1-201ENST00000463339 476 ntBASIC4.09□□□□□ -1.75
CLK2P49760 CYCTP-201ENST00000504253 315 ntBASIC4.09□□□□□ -1.75
CLK2P49760 AC093259.1-201ENST00000509755 300 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms