Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 RNU4-10P-201ENST00000364383 140 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 SNORD32B-201ENST00000364460 84 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 Y_RNA.272-201ENST00000364696 102 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 RNU6-1130P-201ENST00000365434 107 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 Y_RNA.412-201ENST00000384001 104 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 RNU6-1083P-201ENST00000384022 107 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SLC6A11P48066 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC6A11P48066 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC6A11P48066 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC6A11P48066 AC104027.1-201ENST00000521887 300 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC6A11P48066 AL078604.3-201ENST00000615580 211 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 AC013791.1-201ENST00000616619 62 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 AC002064.3-201ENST00000623448 346 ntBASIC3.1□□□□□ -1.91
SLC6A11P48066 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SLC6A11P48066 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC6A11P48066 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SLC6A11P48066 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SLC6A11P48066 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC6A11P48066 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC6A11P48066 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SLC6A11P48066 AC110774.1-201ENST00000623567 2018 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC6A11P48066 RNU6-486P-201ENST00000363116 107 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 Y_RNA.341-201ENST00000365341 102 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 Y_RNA.441-201ENST00000384123 112 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 SNORA72.4-201ENST00000384174 132 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 MIR586-201ENST00000385035 97 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 RNU7-14P-201ENST00000459331 62 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 HMGN2P9-201ENST00000476875 229 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 RPS27AP9-201ENST00000477681 438 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC6A11P48066 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC6A11P48066 SNORA64.4-201ENST00000516632 81 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 SCARNA20.6-201ENST00000517251 106 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 RPL17P51-201ENST00000605218 238 ntBASIC3.09□□□□□ -1.91
SLC6A11P48066 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
SLC6A11P48066 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
SLC6A11P48066 AC103988.1-201ENST00000566382 2177 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SLC6A11P48066 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A11P48066 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A11P48066 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A11P48066 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 RNU6-704P-201ENST00000364162 103 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 Y_RNA.357-201ENST00000365487 109 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 MIR1294-201ENST00000408503 142 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A11P48066 SEPT7P4-201ENST00000437076 306 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 AL135938.1-201ENST00000443141 297 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC6A11P48066 RAC1P5-201ENST00000512182 576 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 AC091826.1-201ENST00000514065 313 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 SCGB1D5P-201ENST00000515134 247 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 Y_RNA.797-201ENST00000515977 94 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 RN7SKP132-201ENST00000516001 208 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A11P48066 AP001485.1-201ENST00000604799 199 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 AC007318.2-201ENST00000620999 243 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 MTND1P7-201ENST00000632801 297 ntBASIC3.08□□□□□ -1.92
SLC6A11P48066 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
SLC6A11P48066 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A11P48066 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC6A11P48066 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A11P48066 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A11P48066 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.07□□□□□ -1.92
SLC6A11P48066 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A11P48066 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SLC6A11P48066 Y_RNA.121-201ENST00000363309 113 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 RNU6-1274P-201ENST00000384557 107 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 SNORA70.12-201ENST00000516084 153 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 AC093331.1-201ENST00000521474 169 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 AC021269.2-201ENST00000532318 330 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 GTF3AP2-201ENST00000557014 266 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 MIR4753-201ENST00000585119 83 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC6A11P48066 AC023043.3-201ENST00000593113 385 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 AC006023.1-201ENST00000603944 259 ntBASIC3.07□□□□□ -1.92
SLC6A11P48066 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SLC6A11P48066 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SLC6A11P48066 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC6A11P48066 AC073325.2-201ENST00000339545 159 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC6A11P48066 RNU6-899P-201ENST00000363947 107 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 RNU6-944P-201ENST00000364023 107 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 RNU6-312P-201ENST00000364629 107 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 Y_RNA.368-201ENST00000365547 113 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 RNU6-449P-201ENST00000383914 107 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 SNORD14D-201ENST00000384390 87 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 SNORA8.3-201ENST00000384679 139 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 RNU6-381P-201ENST00000391259 108 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 AL031121.1-201ENST00000406553 254 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 MIR1283-1-201ENST00000408494 87 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC6A11P48066 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms